Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1710 |
Symbol | |
ID | 3716700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1905648 |
End bp | 1906277 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_347442 |
Protein GI | 77457937 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0974274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGG AAACCTGGCT GCTGTTCAGC GGCGCTGCGC TGGTAGTGAT CCTGATTCCG GGGCCGCTGT CGTTGCTGAT GATCAGCAAC AGTCTGAACT ACGGTCTGCG TCGTTCGTAC CCGGCGTTTC TTGGCGGCGT GTTCGCCTCG ATCTGCCTGC TCAGCGCCTC GGCGCTGGGG TTGGGCGCCC TGTTGCTGGC GTCCGAGAAA CTGTTCAGTG CCCTGAAAAT CATCGGTGCG ATCTACCTGT TCTACCTTGC CTGGCAGAGC TGGCAGCAAT CGCGTCAGCC GTCGATGGGT GCCGAAGTGC CTCAGGCCGC ACCGGTTCCG AAATTCCGCG CGCTGTTCAG CCGGGCCTTC GTGCTGGGCG CGAGCAATCC GAAAGACATT TTGTTTTTCG CCGCGTTTCT GCCGCAATTT CTCAGCGCCG AGCAACCGTT CCTGCCGCAA CTGCTGGTGA TGATCGCCAC CTGGACGCTG CTCGATCTGC TGTGCAAATT GACCTACGGC CTCGGTGCCC ATGGCGCGGC GCGTTATCTG CGCAGCGGCA AGGGGCAGAG CTGGTTCAAC CGCATCAGCG CCGGACTCTT CGGGGGGGCT GGTGCAGCTT CACTGCTGAG CAGCCACTGA
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Protein sequence | MSLETWLLFS GAALVVILIP GPLSLLMISN SLNYGLRRSY PAFLGGVFAS ICLLSASALG LGALLLASEK LFSALKIIGA IYLFYLAWQS WQQSRQPSMG AEVPQAAPVP KFRALFSRAF VLGASNPKDI LFFAAFLPQF LSAEQPFLPQ LLVMIATWTL LDLLCKLTYG LGAHGAARYL RSGKGQSWFN RISAGLFGGA GAASLLSSH
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