Gene Pfl01_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1710 
Symbol 
ID3716700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1905648 
End bp1906277 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content62% 
IMG OID 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_347442 
Protein GI77457937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0974274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGG AAACCTGGCT GCTGTTCAGC GGCGCTGCGC TGGTAGTGAT CCTGATTCCG 
GGGCCGCTGT CGTTGCTGAT GATCAGCAAC AGTCTGAACT ACGGTCTGCG TCGTTCGTAC
CCGGCGTTTC TTGGCGGCGT GTTCGCCTCG ATCTGCCTGC TCAGCGCCTC GGCGCTGGGG
TTGGGCGCCC TGTTGCTGGC GTCCGAGAAA CTGTTCAGTG CCCTGAAAAT CATCGGTGCG
ATCTACCTGT TCTACCTTGC CTGGCAGAGC TGGCAGCAAT CGCGTCAGCC GTCGATGGGT
GCCGAAGTGC CTCAGGCCGC ACCGGTTCCG AAATTCCGCG CGCTGTTCAG CCGGGCCTTC
GTGCTGGGCG CGAGCAATCC GAAAGACATT TTGTTTTTCG CCGCGTTTCT GCCGCAATTT
CTCAGCGCCG AGCAACCGTT CCTGCCGCAA CTGCTGGTGA TGATCGCCAC CTGGACGCTG
CTCGATCTGC TGTGCAAATT GACCTACGGC CTCGGTGCCC ATGGCGCGGC GCGTTATCTG
CGCAGCGGCA AGGGGCAGAG CTGGTTCAAC CGCATCAGCG CCGGACTCTT CGGGGGGGCT
GGTGCAGCTT CACTGCTGAG CAGCCACTGA
 
Protein sequence
MSLETWLLFS GAALVVILIP GPLSLLMISN SLNYGLRRSY PAFLGGVFAS ICLLSASALG 
LGALLLASEK LFSALKIIGA IYLFYLAWQS WQQSRQPSMG AEVPQAAPVP KFRALFSRAF
VLGASNPKDI LFFAAFLPQF LSAEQPFLPQ LLVMIATWTL LDLLCKLTYG LGAHGAARYL
RSGKGQSWFN RISAGLFGGA GAASLLSSH