Gene Pfl01_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1661 
Symbol 
ID3716795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1852590 
End bp1853132 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content65% 
IMG OID 
ProductTetR family transcriptional regulator 
Protein accessionYP_347393 
Protein GI77457888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0333899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0197057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTA AAGAAGGTTT ACGCCCGGGC GGTCGCAGTG CCCGGGTGCA GGAGTCGATT 
CATTCGGCAG TCCGCGCGCT TCTGCAAGAA CAGGAGCGCT CAACGGTGAC CGTCCCGCAA
ATCGCGGCGC GCGCCGGGGT GACGCCGTCG ACGATTTATC GACGCTGGGG CGATCTAGCG
GCCTTGCTGG CCGACGTCGC CCTCGCCCGC ATGCGCCCCG ACAGCGAGCC GGCTGAAACC
GGCAGTCTGC GCAGCGATAT CCGCGCGTGG GCGGAACAAT ATCTCGACGA AATGAGTTCG
GAGCCAGGGC GCAACATGAT GCGCGACGTG CAGGCGAGTG CAACGCCGGG CTACTGCGTG
GCGATCATCG GCGCGCAGTT GCAGACCATC ATCGAGCGCC ACCCCAAGGA ACCGGCGCCG
AGCGTGGATC GGCTGATCAA TCTGGTGGTG TCCCCGGTGG TGTTCCGCAT TCTGTTTTCG
GCAGCGCCGC TGGAAGTCGA AGAACTGCAC CGCCTGATCG ACCTCGCGCT CAAACCGGAC
TGA
 
Protein sequence
MAIKEGLRPG GRSARVQESI HSAVRALLQE QERSTVTVPQ IAARAGVTPS TIYRRWGDLA 
ALLADVALAR MRPDSEPAET GSLRSDIRAW AEQYLDEMSS EPGRNMMRDV QASATPGYCV
AIIGAQLQTI IERHPKEPAP SVDRLINLVV SPVVFRILFS AAPLEVEELH RLIDLALKPD