Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1661 |
Symbol | |
ID | 3716795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1852590 |
End bp | 1853132 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_347393 |
Protein GI | 77457888 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0333899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0197057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATTA AAGAAGGTTT ACGCCCGGGC GGTCGCAGTG CCCGGGTGCA GGAGTCGATT CATTCGGCAG TCCGCGCGCT TCTGCAAGAA CAGGAGCGCT CAACGGTGAC CGTCCCGCAA ATCGCGGCGC GCGCCGGGGT GACGCCGTCG ACGATTTATC GACGCTGGGG CGATCTAGCG GCCTTGCTGG CCGACGTCGC CCTCGCCCGC ATGCGCCCCG ACAGCGAGCC GGCTGAAACC GGCAGTCTGC GCAGCGATAT CCGCGCGTGG GCGGAACAAT ATCTCGACGA AATGAGTTCG GAGCCAGGGC GCAACATGAT GCGCGACGTG CAGGCGAGTG CAACGCCGGG CTACTGCGTG GCGATCATCG GCGCGCAGTT GCAGACCATC ATCGAGCGCC ACCCCAAGGA ACCGGCGCCG AGCGTGGATC GGCTGATCAA TCTGGTGGTG TCCCCGGTGG TGTTCCGCAT TCTGTTTTCG GCAGCGCCGC TGGAAGTCGA AGAACTGCAC CGCCTGATCG ACCTCGCGCT CAAACCGGAC TGA
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Protein sequence | MAIKEGLRPG GRSARVQESI HSAVRALLQE QERSTVTVPQ IAARAGVTPS TIYRRWGDLA ALLADVALAR MRPDSEPAET GSLRSDIRAW AEQYLDEMSS EPGRNMMRDV QASATPGYCV AIIGAQLQTI IERHPKEPAP SVDRLINLVV SPVVFRILFS AAPLEVEELH RLIDLALKPD
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