Gene Pfl01_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1581 
Symbol 
ID3716949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1769187 
End bp1769642 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content62% 
IMG OID 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_347313 
Protein GI77457808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.409535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.688785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCGC TGCGTAAAAA GCGTCTGATC ATCATCCTGG CAATTCTGGT CGGGGTCGGC 
GCTGCCGTCG GCCTGGCCCT GAGCGCCCTG CAGCAGAACA TCAACCTGTT TTACACGCCG
ACCCAGATCG CCAACGGCGA AGCGCCGCAA GACACCCGCA TCCGTGCCGG CGGCATGGTC
GAGAAGGGCT CACTGCAACG CTCCACAGAT TCGCTGGACG TCAAATTCGT GGTCACCGAT
TTCAACAAGT CCGTGACCAT CACCTATCGC GGGATCCTGC CGGACCTGTT CCGCGAAGGG
CAGGGCATCG TCGCGCTCGG CAAGCTCAAC GCCGATGGCG TGGTGGTCGC CGATGAAGTG
CTGGCCAAGC ACGACGAGAA ATACATGCCG CCGGAAGTGA CCAAAGCCCT GAAGGACAGC
GGTCAATCCG CGCCAACCCC TGCGAAGGAG GGTTGA
 
Protein sequence
MNPLRKKRLI IILAILVGVG AAVGLALSAL QQNINLFYTP TQIANGEAPQ DTRIRAGGMV 
EKGSLQRSTD SLDVKFVVTD FNKSVTITYR GILPDLFREG QGIVALGKLN ADGVVVADEV
LAKHDEKYMP PEVTKALKDS GQSAPTPAKE G