Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1579 |
Symbol | |
ID | 3716947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1768262 |
End bp | 1769017 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | cytochrome c-type biogenesis protein CcmC |
Protein accession | YP_347311 |
Protein GI | 77457806 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.9226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.734058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGA CCTGGTTTCA CAAGCTCGGC TCGCCCAAGT GGTTCTACGG CATCAGCAGC AAGTTCCTGC CGTGGTTGAG CATCGCAGCG TTGTTGCTGA TCTGCGTTGG CGTCATCTGG GGCCTGGCTT TCGCGCCGCC GGACTATCAG CAAGGCAACA GCTTTCGCAT CATCTATATC CACGTACCCG CCGCGATGCT CGCTCAGTCG ATCTACGTGA TGCTGGCGGT GTGCGGGGTG GTCGGGCTGG TGTGGAAGAT GAAACTGGCC GACGTCGCCC TGCAATGCGC CGCACCGATC GGCGCGTGGA TGACCGCCGT GGCGCTGGTC ACCGGGGCGA TCTGGGGCAA GCCGACCTGG GGGTCGTGGT GGGTCTGGGA CGCGCGCCTG ACCTCGATGC TGATTCTGCT GTTTCTGTAT TTCGGCGTGA TCGCCCTGGG CAACGCCATC AGCAATCGCG ACAGCGCCGC CAAGGCCTGC GCGGTGCTGG CCATCGTCGG TGTGATCAAC ATTCCGATCA TCAAATACTC GGTGGAGTGG TGGAACACCC TGCATCAGGG CGCGACCTTC ACCCTCACCG AAAAACCGGC GATGCCCGTC GAGATGTGGC TGCCGCTGCT GCTGACGGTG CTGGGTTTCT ACTGTTTCTT CGGCGCCGTG CTGTTGCTGC GCATGCGCCT TGAAGTGCTC AAGCGCGAAG CCCGCGCCAG TTGGGTGAAA GAAGAAGTGC AGAACAGCCT GGAGGCCGCT CGATGA
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Protein sequence | MNWTWFHKLG SPKWFYGISS KFLPWLSIAA LLLICVGVIW GLAFAPPDYQ QGNSFRIIYI HVPAAMLAQS IYVMLAVCGV VGLVWKMKLA DVALQCAAPI GAWMTAVALV TGAIWGKPTW GSWWVWDARL TSMLILLFLY FGVIALGNAI SNRDSAAKAC AVLAIVGVIN IPIIKYSVEW WNTLHQGATF TLTEKPAMPV EMWLPLLLTV LGFYCFFGAV LLLRMRLEVL KREARASWVK EEVQNSLEAA R
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