| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1529 |
|---|
| Symbol | |
|---|
| ID | 3717032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1717258 |
|---|
| End bp | 1718712 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | flagellar hook-associated 2-like |
|---|
| Protein accession | YP_347261 |
|---|
| Protein GI | 77457756 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.746516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTC CAATTTTACC GGGTTCGGGC CTGGGTTCCG GCCTGGACAT CGGTGCAATC
GTTACTGCGC TGGTCAACGC CGACAAGTCG CCGAAGCAGA CGCAGATCGA TAACGCGACA
AAAACCAATA CGCTGAAGAT TTCCGGCATT GGCACGTTGA AGAGTGCGCT GACCGCATTT
CAGACGACGA TGACCAATCT GGGCAGCAAG ACCAGTCCTG CGTTTGCCGG TTATACCGCG
ACTTCGGGTA CGCCCGCAGT TTTGGGTGTG ACTTCGGATA ACACCGCAGT TTCCGGTACT
TACAGCGTTG TTGTGACTAA GCTGGCCACC GGCTCGAAAG TAGCCAGTGC ATCCTTCGCC
GGCGGTGCGG CCAGTGCCAT TCCGAGTGGT ACCCTGAAAA TCAGTCAGAA TGGCACTGAT
TACAATGTCA CGATTCCAGC CAACGCGACC TTGCAGAGCA CTCGTGACGC AATCAACACG
GCTCAGGGCG TCAATGGTAT TTCTGCCAAC ATCGTGACTG ACAGCACGGG TGCTTCGCGC
CTGGTGATCA GCTCCAGCAA AACGGGTGCG GGTACTGACC TGAGTGTCAG TGGCATTGCC
GGCCTGGAAA TTGATGGTAC CCAGCAGTTG GGTGCGACTC CGGCGCCTGG CGCTGCCGGT
TCCGTCAATG GTCTTGCACA GGATGCGCAG CTGACCATCG ACGGTCTTTC GGTGAGCAGC
AAAAGCAACA CGGTAACCGG AGCCATCAGC GGTTTGACGA TGAACCTGCT GACGGTCCCT
GCCACGCCGG GTACGCCAGT CACGGTCACT GTCGACACCA ACACCAAAGG CTTGCAGACG
TCGGTTCAGG CCTTCGTCGA CGCTTTCAAC ACCTTGAAGA GCACCATCGA TACCTTGTCC
AAGGCGACGC CGGACGAAGA TGGCAAGCTG ACCGTTCAGG CGGCCTTCAC TGGTGACTCC
CTGCCGCGTT CTCTGATTGC CGATATCCGT GCTCAACTGA CTGAGGGCGG CGCAGGCGAT
ACGTTGAAAT ACCTGTCGCA AATGGGCGTT ATGACCGACC GGCTCACCGG TAACCTGACC
CTCGACACGA CGGCGTTCAA CAAGGCGATG GCCACGCCGG GCATGACTGG TCAGGTGCAG
AAGATGTTCA CCGGCACTGA CGACAAGAAC GGTCTGCTGA CGCGCATGAG CAAGGCAGTG
GATCCGTATC TCAAGCCATC GGCTGACGGC AAGACCACCA CGGGTCTGCT TGACCAGCGC
ATGACGATCC TGAACAACAA CACCCGCAAT ATTACTTCCC AGCAGCTGGC GCTGGATCTG
CGTGTGGCCA ACCTGACCAA GACGTTGACT GCCAAGTACA ACGCCATGGA CTTGCTGGTA
GGGCAAATGA AAGCGACGGC AAGCAACATT ACGTCCTTCT TTGCCTCGCT CAACGCTCAG
CAATCCGCGA AGTAA
|
|---|
| Protein sequence | MASPILPGSG LGSGLDIGAI VTALVNADKS PKQTQIDNAT KTNTLKISGI GTLKSALTAF
QTTMTNLGSK TSPAFAGYTA TSGTPAVLGV TSDNTAVSGT YSVVVTKLAT GSKVASASFA
GGAASAIPSG TLKISQNGTD YNVTIPANAT LQSTRDAINT AQGVNGISAN IVTDSTGASR
LVISSSKTGA GTDLSVSGIA GLEIDGTQQL GATPAPGAAG SVNGLAQDAQ LTIDGLSVSS
KSNTVTGAIS GLTMNLLTVP ATPGTPVTVT VDTNTKGLQT SVQAFVDAFN TLKSTIDTLS
KATPDEDGKL TVQAAFTGDS LPRSLIADIR AQLTEGGAGD TLKYLSQMGV MTDRLTGNLT
LDTTAFNKAM ATPGMTGQVQ KMFTGTDDKN GLLTRMSKAV DPYLKPSADG KTTTGLLDQR
MTILNNNTRN ITSQQLALDL RVANLTKTLT AKYNAMDLLV GQMKATASNI TSFFASLNAQ
QSAK
|
|---|
| |