Gene Pfl01_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1446 
Symbol 
ID3717163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1619080 
End bp1619916 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content54% 
IMG OID 
ProductRNA binding S1 
Protein accessionYP_347178 
Protein GI77457673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTAG TCGGGCGTTA CAACAGTTTG CAAGTGGTGA AACACACTAA CTTCGGTTTA 
TATCTGGACG GCGGTGCCGA CGGCGAAATT CTTTTGCCCA ACCGTTACAT CCCTAAAGAT
ATTCCCAGCG AAGATGAAGA CTGGCTCAAT GTTTTCATTT ATCTGGACAG CGATGACAAA
CTTATTGCCA CCACTGAAAA ACCAAAAGTT CAGGTCGGTG AGTTTGCCAG TTTGAAAGTT
GTTGAAGTCA ACAGCATCGG CGTGTTCCTC GACTGGGGCC TGCCGAAGGA TCTGCTGCTG
CCGTACTCCG AAGAAAAACG CCAGATGACT GCCGGCGAGT ACTGCGTGGT GCACGTCTAC
CTCGACAAGC ACACCCGCCG CATCACCGCC ACCGCGCGCC TGGATCGTTA TCTGGACAAG
ACCCCGGCCA ACTACAGCGC GGGCCAGGAA GTTGATCTGC TGGTCGCCGA AGCCACCGAC
ATGGGCTTCA AGGCGATCAT CAACAACAAG CACTGGGGTT TGATTCACAA GAATGAAATC
TTCAAGTTCA TGCGGGCCGG CATGCGCGAG AAAGGCTTCA TCAAGGAAGT GCGCGCCGAC
GGCAAGATCA GCCTGAGCCT GCAACCAGTG GGGCAGGAAG CAGCCAGCAG CCTGAACTCG
AAGATCCTCG CGAAGTTGCG CGAAAGCAAC GGCACCCTGG CCGTCAGCGA CAAGAGCGAT
CCGGCACTGA TCAGCAGCCT GTTCGGTGTC AGCAAGGGCA ACTTCAAGAA GGCTATCGGT
TCGTTGTACA AGAACGGCCA GATTGTCATT CACGCCGATC GCATTGAACT AACCTGA
 
Protein sequence
MALVGRYNSL QVVKHTNFGL YLDGGADGEI LLPNRYIPKD IPSEDEDWLN VFIYLDSDDK 
LIATTEKPKV QVGEFASLKV VEVNSIGVFL DWGLPKDLLL PYSEEKRQMT AGEYCVVHVY
LDKHTRRITA TARLDRYLDK TPANYSAGQE VDLLVAEATD MGFKAIINNK HWGLIHKNEI
FKFMRAGMRE KGFIKEVRAD GKISLSLQPV GQEAASSLNS KILAKLRESN GTLAVSDKSD
PALISSLFGV SKGNFKKAIG SLYKNGQIVI HADRIELT