| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1436 |
|---|
| Symbol | |
|---|
| ID | 3717153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1610611 |
|---|
| End bp | 1611909 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_347168 |
|---|
| Protein GI | 77457663 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCA AACAGCTCTG GCTCAACGCC CAAGACCTCT GGGGTGCCCT CGAACAACAC
CCGCTCCTGC ACGCCGGCCT GGCACTGCTC CTGTTATTGG TGATCGCGCT GGTACTCGGA
CGAGTGGCGC GTTATCTGAT CCTGCATGCC AGCCGCATGC TCGGTCGCCA GCCCGCACTG
CACTGGATCA ACGACTTTCG CCATAACAAG GTGTTTCAGC GTCTGGCGCA GATGACGCCG
TCGCTGGTGA TCCAGTTCGG CCTGCACCTG GTGCCGGAGC TGAGCAAGAC TGCCACGGTG
TTCCTCGGCA ATGTGGCGCT GGCATTTACC ATTCTGTTCC TGCTGCTGTC GGTCAGCGCC
CTGCTCAATG CGCTGCTGGA CATCTACGCC CGCACCGAAC ACGCCCGCAC CCGCTCGATC
AAGGGGTATG TGCAACTGGC GAAAATGGTC CTGTACGTGT TCGGCGCGAT CATCATCGTC
GCCACCCTGA TCGATCGTTC GCCGTTGTTG CTGCTGTCCG GTCTCGGTGC GATGTCGGCG
GTGATCCTGT TGGTCTACAA GGACACCCTG CTGTCGTTCG TCGCCAGCGT GCAACTGACC
AGCAACGACA TGCTGCGGGT CGGCGACTGG ATCGAGATGC CGCAAGTCGG CGCCGATGGC
GACGTGGTCG ACATCACTTT GCACACGGTC AAGGTACAGA ACTTCGACAA AACCATCGTC
TCGATCCCGA CCTGGCGCCT GATGTCCGAG TCGTTCCGCA ACTGGCGCGG CATGCAGCAG
TCCGGCGGGC GACGGATCAA GCGCAGTCTG TTCATCGACG CCAGCGGAGT GCGCTTCATC
CGCGACGATG AAGAAGAAAA ACTCTCCCAG GTGCACCTGC TGACCGCGTA CATGGGCCGC
AAGAAAGCCG AGCTCAAGGC CTGGAACGAA GCGCAGGGCA ACGTCGCGGC GATGTCGGCC
AACCGCCGGC GCATGACCAA CATCGGCACC TTCCGCGCTT ACGCGCTGGC CTATCTGAAG
AGTCACCCGG AGATCCAGCC GAACATGACC TGCATGGTCC GCCAGATGCA AACCACCGCC
CAGGGCATTC CGCTGGAAAT CTACTGCTTT ACCACCACCA CGGTGTGGGC CGATTACGAG
CGGATCCAGG GGGATATTTT CGATTACCTG CTGGCGGTGC TGCCGGAGTT CGGGCTGAGC
CTGTATCAGC AGCCGAGCGG TGGGGATTTG CGGTCAGGGT TGTTGCCGGC AGTCCTTGGC
GCGAGCCACA TTCCAGAAGC CGAAAAACAT CTGATGTAG
|
|---|
| Protein sequence | MDFKQLWLNA QDLWGALEQH PLLHAGLALL LLLVIALVLG RVARYLILHA SRMLGRQPAL
HWINDFRHNK VFQRLAQMTP SLVIQFGLHL VPELSKTATV FLGNVALAFT ILFLLLSVSA
LLNALLDIYA RTEHARTRSI KGYVQLAKMV LYVFGAIIIV ATLIDRSPLL LLSGLGAMSA
VILLVYKDTL LSFVASVQLT SNDMLRVGDW IEMPQVGADG DVVDITLHTV KVQNFDKTIV
SIPTWRLMSE SFRNWRGMQQ SGGRRIKRSL FIDASGVRFI RDDEEEKLSQ VHLLTAYMGR
KKAELKAWNE AQGNVAAMSA NRRRMTNIGT FRAYALAYLK SHPEIQPNMT CMVRQMQTTA
QGIPLEIYCF TTTTVWADYE RIQGDIFDYL LAVLPEFGLS LYQQPSGGDL RSGLLPAVLG
ASHIPEAEKH LM
|
|---|
| |