| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1316 |
|---|
| Symbol | |
|---|
| ID | 3717353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1491363 |
|---|
| End bp | 1492694 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | general substrate transporter |
|---|
| Protein accession | YP_347048 |
|---|
| Protein GI | 77457543 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA ATGTAATGGA GGCGGGCGCA AGCTCGTCCG TCGATCACGA TGCCGAAAAA
GCCCTGGTCA GCAAGGTCGC CTGGCGCCTG ATGCCGTTGA TCATGGTCTG CTACCTGTTC
GCGTTCTTCG ACCGCATCAA CATCAGTTTC GCCAAGTTCC AGTTGCAGGC CGACCTGAGC
CTGAGCGACA CCGCTTACGG TCTCGGTGCC GGGCTGTTCG TGGTCGGTTA CGTGCTGTTC
GAAGTACCGA GCAACATGAT GCTGTACAAG GTTGGCGCGC GGCGCTGGAT CGCCCGGATC
ATGATGTCCT GGGGCGTGGC GACGGCGCTG ATGGTGTTCG TCAACAGTGA ATGGCAGTTC
TACGTGCTGC GCTTTCTGAT CGGCGCGATG GAGGCCGGTT TCGCCCCCGG CGTGCTGTAT
TACCTGACGC TGTGGTTCCC GCAGCACTTC CGTGGCCGCA TCACCTCAAT GCTGTTTCTG
GCCTCGGCGT TTGCCGGGCT GGTCGGTGCG CCGTTCTCCG GACTGGTGCT GGAACACCTT
GATGGCGTGT TGCAGATGCG CGGCTGGCAC TGGTTGTTTC TGCTCGGTGG CGTGCCCTGT
GTCGGCCTCG GGTTTTTGGT ACTGACCTTG CTCAAGGACC GCATCGAGGA CGCTCACTGG
CTGACCCCGG AAGAGAAAAA ACTGCTGGCC AGCCGCATCG CCCATCACGA ACCGCACAAG
AGCGGCGGCT CGTTGCTGGC GGCGCTGAAG ATTCCGGGTT TCCTGACTTT GGGGCTGATC
TACTTCCTGA TCCAGGTCGC GTCCTACGGC CTGAATTTCT GGGCTCCGCA ACTGATCCGC
AGTGCCGGCA CCGAGAGCCC GGTGATGATC GGCCTGCTGA CCTCGATCCC TTACATTTGT
GGTGCGATCA GCATGGTGGT GATCGGTCGT CTGTCCGATG CTACGGGTGA GCGGCGCAAG
TTTGTCGCGG GGCTGGTGAT CGTCGGCGCC ATCGGCTTTT TCAGCGCGGG GATTTTTGCC
AGCCACACCA CGTTTTTGAT CGTCGCTCTT GGCTTGTTGG GCGCCGGGAT CATTGCGTCG
ATTCCGAGCT TCTGGACCTT GCCACCGAAA CTGCTGGCGG GTGCCGGGGC CGGTGCGGCG
GGCGGGATTG CGGTGATCAA TACACTGGGG CAGTTCGGCG GCATCGTCAG TCCGGTGATG
GTCGGCCGGA TCAAGGACCT GACTGGCAGT ACTACACCGG CACTGTATGT CATCGGTGTG
GCGGCACTGA TCGCGGCGGC GTTGCTGCTG TGGGGGCTGC CGCAGAAATT GCGCACACTC
GACAAGTACT GA
|
|---|
| Protein sequence | MSLNVMEAGA SSSVDHDAEK ALVSKVAWRL MPLIMVCYLF AFFDRINISF AKFQLQADLS
LSDTAYGLGA GLFVVGYVLF EVPSNMMLYK VGARRWIARI MMSWGVATAL MVFVNSEWQF
YVLRFLIGAM EAGFAPGVLY YLTLWFPQHF RGRITSMLFL ASAFAGLVGA PFSGLVLEHL
DGVLQMRGWH WLFLLGGVPC VGLGFLVLTL LKDRIEDAHW LTPEEKKLLA SRIAHHEPHK
SGGSLLAALK IPGFLTLGLI YFLIQVASYG LNFWAPQLIR SAGTESPVMI GLLTSIPYIC
GAISMVVIGR LSDATGERRK FVAGLVIVGA IGFFSAGIFA SHTTFLIVAL GLLGAGIIAS
IPSFWTLPPK LLAGAGAGAA GGIAVINTLG QFGGIVSPVM VGRIKDLTGS TTPALYVIGV
AALIAAALLL WGLPQKLRTL DKY
|
|---|
| |