Gene Pfl01_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1106 
Symbol 
ID3716511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1279129 
End bp1279935 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content60% 
IMG OID 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_346838 
Protein GI77457333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.500299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC AACGCATCAT CACTGCACTG ATTCTGTTGC CGATCGCTCT GGGCGGATTT 
TTCCTGCTCG AGGGTTCCGG TTTTGCCCTG TTCATCGGTC TGGTCGTGAG TCTGGGTGCC
TGGGAGTGGG CGCGTCTGGC CGGTTTCACC GCGCAGGCAT TTCGTGTCGG CTACGCGGCG
GTCGTCGCGC TGATGCTGTT TGTCATGTAT ATCCTTCCGG GGCTGGCGCC TTGGGTGCTG
GGTGCTTCGG TAATCTGGTG GGCATTGGCG ACCTGGCTGG TGCTGACGTA CCCGCGTTCC
AGCGAGCGCT GGTCCAGTGC CGCCAGCAAA CTGGTGATTG GTTTGCTGAT TCTGTTGCCC
GCCTGGCAGG GGTTGGTGCT GATCAAGCAG TACCCGCTCG GTAACTGGTT GATCATGGCG
GTGATGGTGC TGGTCTGGGG GGCTGATATC GGGGCGTACT TCTCCGGTCG TGCATTCGGC
AAGCGCAAGC TGGCGCCGCA AGTCAGTCCC GGCAAAAGTT GGGAAGGCGT GTATGGCGGT
CTGGCGCTGA GCCTGGTCAT CACCACGCTG GTCGCACTGT TCCGTGACTG GACGGTGGCG
CAACTGTTCA AGGGGTTGAT CGGTGCAGCG GTGATTGTCT TCATCTCTGT GGTGGGTGAT
CTGACCGAAA GCATGTTCAA GCGCCAGTCC GGCATCAAGG ACAGCAGTAA TCTGCTGCCG
GGGCATGGTG GCGTGCTGGA TCGCATCGAC AGTCTGACGG CGGCGATCCC GGTCTTTGCG
GTGCTGTTGT GGATGGCGGC ATCGTGA
 
Protein sequence
MLKQRIITAL ILLPIALGGF FLLEGSGFAL FIGLVVSLGA WEWARLAGFT AQAFRVGYAA 
VVALMLFVMY ILPGLAPWVL GASVIWWALA TWLVLTYPRS SERWSSAASK LVIGLLILLP
AWQGLVLIKQ YPLGNWLIMA VMVLVWGADI GAYFSGRAFG KRKLAPQVSP GKSWEGVYGG
LALSLVITTL VALFRDWTVA QLFKGLIGAA VIVFISVVGD LTESMFKRQS GIKDSSNLLP
GHGGVLDRID SLTAAIPVFA VLLWMAAS