Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1089 |
Symbol | |
ID | 3716494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1259455 |
End bp | 1262112 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | glycosyl transferase family protein |
Protein accession | YP_346821 |
Protein GI | 77457316 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.182025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCC TCTTGGCGTC AACCAGCCGA CCCTTCGTTC CACAGCCTTT GGAACCCGAC ACAGCTATGT CATCGCGTAA ATTTGGACTC AACCTGGTGG TGGTTCTGGC AATCGCCGCC CTGTTCACCG GTTTCTGGGC GCTGATCAAT CGCCCCGTCT CCGCGCCGAA CTGGCCGGAG CAGATCTCCG GTTTCTCCTA TTCACCATTC CAGCAAGGAC AGTTCCCACA GAAGGATCAG TATCCGTCCG ACGATGAAAT GCGCCGCGAC CTGGAGATCA TGAGCAAGCT GACGGACAAC ATCCGCATCT ACTCGGTCGA CGGCTCCCTG CAGGACATCC CGAAACTGGC GGAAGAATTC GGCCTTCGCG TGACCCTGGG GATCTGGATC AGCCCCGACC AGGAACGCAA CGAGCGGGAA ATCACCCGCG CCATCGAACT GGCCAACACC TCGCGCAGCG TAGTTCGCGT AGTGGTCGGT AACGAAGCGA TCTTCCGCAA GGAAATCACT GCCCAGGAAC TCAGCGTGTT GCTCGACCGC GTGCGCGCGG CAGTCAAAGT GCCGGTGACC ACCTCCGAAC AGTGGCACGT CTGGGAAGAG CACCCGGAAC TGGCCAAGCA CGTCGACCTG ATCGCCGCGC ACGTGCTGCC TTACTGGGAA TTCATTCCGG TGGACAAGGC CGGGCAGTTC GTTTTCGACC GCGCTCGCGA CCTGAAAAAG ATGTTCCCGA AAAAGCCGCT GCTGCTGTCC GAAGTGGGCT GGCCGAGCAA CGGCCGCATG CGCGGTGGCG CCGATGCGTC GCCGGCGGAT CAGGCGATCT ACCTGCGCAC GCTGGTCAAC AAACTCAACC GCCAGGGCTT CAACTACTTC GTGATCGAAG CGTTCGACCA GCCATGGAAG GCCAGCGACG AAGGTTCGGT CGGCGCTTAC TGGGGCGTGT TCAACGCCGC GCGCCAGCAG AAATTCAACT TCGAAGGCCC GGTGGTGGCG ATCCCGCAAT GGCGCGTGCT GGCCATCGGT TCGGTGGTGC TGGCGCTGTT GTCGCTGACC CTGCTGATGA TCGACGGCTC GGCCCTGCGT CAGCGCGGCC GTACCTTCCT GACCTTTATC GCGTTCCTCT GCGGTTCGGT GCTGGTGTGG ATCGGTTACG ACTACAGCCA GCAATACAGC ACGTGGTTCA GCCTGACGGT GGGCTTCCTG CTCGCGCTCG GTGCGCTCGG GGTGTTCATC GTGCTGCTGA CCGAGGCCCA CGAACTGGCC GAGGCGGTGT GGATTCACAA ACGCCGGCGT GAATTCCTGC CGGTGGTCGG CGACTCCGAC TACCGCCCGA AAGTCTCGAT CCACGTGCCC TGCTACAACG AGCCGCCGGA GATGGTCAAA CAGACCCTCA ACGCCCTGGC CAACCTCGAC TATCCGGACT TCGAAGTCCT GATCATCGAC AACAACACCA AGGACCCGGC GGTCTGGGAA CCGGTGCGCG ACTACTGCGA AACCCTCGGC CCGCGCTTCA AGTTCTTCCA CGTCTCGCCC CTGGCCGGTT TCAAGGGCGG CGCGCTGAAC TACCTGATCC CGCACACCGC CAAGGACGCC GAAGTGATCG CAGTGATCGA CTCCGACTAC TGCGTGCACC CGAACTGGCT CAAGCACATG GTGCCGCACT TCGCCGACCC GAAAATTGCC GTGGTGCAGT CGCCGCAGGA TTACCGCGAC CAGAACGAAA GCACCTTCAA GAAGCTCTGC TACGCCGAAT ACAAAGGCTT CTTCCACATC GGCATGGTCA CCCGCAACGA CCGCGACGCG ATCATCCAGC ACGGCACCAT GACCATGACC CGTCGCTCGG TTCTGGAAGA ACTGGGCTGG GCCGACTGGT GCATCTGTGA AGACGCCGAG CTTGGTCTGC GGGTATTCGA GAAAGGCCTG TCGGCGGCGT ATTACCACGA CAGTTATGGC AAGGGTCTGA TGCCGGACAC CTTCATCGAC TTCAAGAAGC AGCGTTTCCG CTGGGCCTAC GGTGCGATCC AGATCATCAA GCGCCACACC CGCAGCCTGC TGCGCGGCAA GGACACCGAG CTGACGCGCG GCCAGCGTTA CCACTTCCTC GCGGGCTGGC TGCCGTGGGT GGCGGACGGC ATGAACATCT TCTTCACCGT CGGCGCGCTG TTGTGGTCGG CGGCGATGAT CATCGTGCCG CAACGGGTCG ACCCACCGCT GCTGATTTTC GCGATCCCGC CGTTGGCGCT GTTCGTGTTC AAGGTCGGCA AGATCATCTT CCTCTACCGT CGCGCCGTGG GCGTGAACCT CAAGGATGCG TTCTGCGCGG CACTGGCCGG TCTGGCGTTG TCGCACACCA TCGCCAAAGC GGTGCTGTAC GGCTTCTTCA CCAGCAGCAT TCCGTTCTTC CGCACCCCGA AAAACGCCGA CAACCATGGC TTCTGGGTGG CGATTTCCGA GGCCCGGGAA GAGCTGTTCA TCATGCTGCT GTTGTGGGGC GCGGCGCTGG GGATCTTCCT GGTGCAGGGC ATTCCGAGCA ACGACATGCG CTTCTGGGTG GCCATGCTGC TGGTGCAATC GCTGCCGTAT GTAGCGGCGC TGATCATGGC GTTCCTGTCG TCGCTGCCAA AACCTGCGGC TGCGCCTGAA CCGGCACCAG TGGTCTAA
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Protein sequence | MRALLASTSR PFVPQPLEPD TAMSSRKFGL NLVVVLAIAA LFTGFWALIN RPVSAPNWPE QISGFSYSPF QQGQFPQKDQ YPSDDEMRRD LEIMSKLTDN IRIYSVDGSL QDIPKLAEEF GLRVTLGIWI SPDQERNERE ITRAIELANT SRSVVRVVVG NEAIFRKEIT AQELSVLLDR VRAAVKVPVT TSEQWHVWEE HPELAKHVDL IAAHVLPYWE FIPVDKAGQF VFDRARDLKK MFPKKPLLLS EVGWPSNGRM RGGADASPAD QAIYLRTLVN KLNRQGFNYF VIEAFDQPWK ASDEGSVGAY WGVFNAARQQ KFNFEGPVVA IPQWRVLAIG SVVLALLSLT LLMIDGSALR QRGRTFLTFI AFLCGSVLVW IGYDYSQQYS TWFSLTVGFL LALGALGVFI VLLTEAHELA EAVWIHKRRR EFLPVVGDSD YRPKVSIHVP CYNEPPEMVK QTLNALANLD YPDFEVLIID NNTKDPAVWE PVRDYCETLG PRFKFFHVSP LAGFKGGALN YLIPHTAKDA EVIAVIDSDY CVHPNWLKHM VPHFADPKIA VVQSPQDYRD QNESTFKKLC YAEYKGFFHI GMVTRNDRDA IIQHGTMTMT RRSVLEELGW ADWCICEDAE LGLRVFEKGL SAAYYHDSYG KGLMPDTFID FKKQRFRWAY GAIQIIKRHT RSLLRGKDTE LTRGQRYHFL AGWLPWVADG MNIFFTVGAL LWSAAMIIVP QRVDPPLLIF AIPPLALFVF KVGKIIFLYR RAVGVNLKDA FCAALAGLAL SHTIAKAVLY GFFTSSIPFF RTPKNADNHG FWVAISEARE ELFIMLLLWG AALGIFLVQG IPSNDMRFWV AMLLVQSLPY VAALIMAFLS SLPKPAAAPE PAPVV
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