| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1038 |
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| Symbol | mdoD |
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| ID | 3716168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1202805 |
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| End bp | 1204433 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_346770 |
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| Protein GI | 77457265 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.667596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGCA GGAATTTGCT CAAAGCGTCC ATGGCCATTG CGGCCTATAC CGGCCTATCG
GCTACGGGCC TGCTGGCCTC CCGCGCCTGG GCCGCCTCTG GCGGTGCCGC CGACGGTGAG
GCCCAGGCCT TCGACTTTGA AACGCTGAAG CGCCAGGCCA AGCAACTGGC CGGCAGCGCC
TATCAGGACA CCAAACAGGT GCTGCCGCCG ACCCTGGCGA CCATGACCCC GCAGAACTTC
AACGCGATCC GCTACGACGG CGAGCATTCG CTGTGGAAGG AGAACAAGGG TCAGCTCGAT
GTGCAGTTCT TCCACGTCGG CATGGGTTTC CGCCAGCCGG TGCGCATGTA CAGCGTCGAT
CCGAAGACCC GCACGGCCCG CGAGGTGCAT TTCCGCCCTC AGCTGTTCAA CTATGAAAAC
ACCTCGGTCG ACACCCAGCA GCTCAAGGGC GACCTAGGTT TTGCCGGCTT CAAGCTGTTC
AAGGCGCCGG AACTGGATCG GCATGACGTG GTGTCGTTCC TCGGCGCCAG CTACTTCCGC
GCCGTGGATG CCACTGGCCA ATATGGCCTC TCCGCCCGTG GCCTGGCTGT CGACACCTAC
GCCAAGAAAC GCGAAGAATT CCCTGACTTC ACCAAGTTCT GGTTCGAGAC CCCGGATCAG
AACGCGACCC GCTTCGTGGT CTACGCCCTG CTCGACTCGC CGAGCGCGAC CGGCGCCTAT
CGCTTCGACA TCGATTGCCA GGCTGAGCGC GTGGTGATGG AAGTCGATGC TCACATCAAC
GCCCGCACCG CCATCGAACA ACTGGGCATC GCTCCGATGA CCAGCATGTT CAGTTGCGGC
ACCCACGAGC GCCGGATGTG CGACACCATC CACCCGCAAA TCCATGACTC GGATCGTCTG
GCCATGTGGC GCGGCAACGG CGAGTGGATC TGCCGTCCGC TGAACAACCC GGCAACCTTG
CAATTCAACG CCTTCGCCGA CACCGATCCG AAAGGTTTCG GTCTGGTGCA GACCGACCAC
GAATTCGCCA ACTATCAGGA CACCGTCGAC TGGTACAGCA AGCGTCCGAG TCTGTGGGTA
GAACCTACAA CCGCGTGGGG CGAAGGCTCT ATCGATCTGC TGGAAATTCC TACAACCGGC
GAGACACTCG ATAACATCGT TGCGTTCTGG ACGCCGAAGA AACCGGTAGC CGCCGGGGAT
TCGCTGAACT ACGGCTACAA GCTCTACTGG AGCGCCCTGC CGCCGGTCGG CACGCCGCTG
GCGCGGGTGC ATGCGACCCG TTCGGGCATG GGAGGCTTCG TCGAAGGCTG GGCACCGGGC
GAGCATTACC CGCCGGTCTG GGCCCGTCGC TTTGCCGTGG ACTTCACCGG TGGTGGGCTT
GATCGCCTGC CACAGGGCAC CGGGATCGAA CCGGTGGTCA CTTGCTCCAA CGGCAAGGTG
CAGGACTTCA GCGTGCTGGT GCTGGATGAC ATCAAGGGCT ACCGGATCCT GTTCGACTGG
TACCCGACCA ACGACAGTGT CGAGCCGGTT GAACTGCGGC TGTTTATCCG CACCAATGAC
CGCACGCTGA GTGAGACCTG GTTGTACCAG TACTTCCCAC CGGCGCCGGA CAAGCGCAAA
TACCCTTGA
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| Protein sequence | MHRRNLLKAS MAIAAYTGLS ATGLLASRAW AASGGAADGE AQAFDFETLK RQAKQLAGSA
YQDTKQVLPP TLATMTPQNF NAIRYDGEHS LWKENKGQLD VQFFHVGMGF RQPVRMYSVD
PKTRTAREVH FRPQLFNYEN TSVDTQQLKG DLGFAGFKLF KAPELDRHDV VSFLGASYFR
AVDATGQYGL SARGLAVDTY AKKREEFPDF TKFWFETPDQ NATRFVVYAL LDSPSATGAY
RFDIDCQAER VVMEVDAHIN ARTAIEQLGI APMTSMFSCG THERRMCDTI HPQIHDSDRL
AMWRGNGEWI CRPLNNPATL QFNAFADTDP KGFGLVQTDH EFANYQDTVD WYSKRPSLWV
EPTTAWGEGS IDLLEIPTTG ETLDNIVAFW TPKKPVAAGD SLNYGYKLYW SALPPVGTPL
ARVHATRSGM GGFVEGWAPG EHYPPVWARR FAVDFTGGGL DRLPQGTGIE PVVTCSNGKV
QDFSVLVLDD IKGYRILFDW YPTNDSVEPV ELRLFIRTND RTLSETWLYQ YFPPAPDKRK
YP
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