Gene Pfl01_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0977 
Symbol 
ID3715960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1137744 
End bp1138403 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_346709 
Protein GI77457204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA ACTCACTCTT GATAAAACGA TCTCTGGTCG ATCAGGCCCT GGACCAATTG 
CGCCAGCGCA TCACCGATGG CAGCTGGCAG GTCGGTCAGC GTCTGCCGAC CGAGCCCGAG
CTGTGCGCAG AACTCGGCAT CAGCCGCAAC ACCGTGCGCG AGGCGATGCG GGTGCTGGCG
TTTTCCGGGT TGATCGAGAT CCGTCAAGGT GACGGCAGTT ACCTGCGGGC GGTGGTCGAT
CCGATGGACA CGCTCAAGGC GCTGTCCAAA TGCTCGCTGG ACCAGGCCCG GGAGACCCGG
CACATCCTTG AAGTCGAGGC CATTGGCCTG GCGGCCTTGC GTCGTACCGA TGAAGACCTC
GTCGCGTTGC ACGAGGCGCT GGGTGTTGCC GGCAGCCACT ACCACGGCGA CCTCGACAGT
TACATCCGCT GCGATCTGGT GTTCCACCGC CGTCTGGTGG ACGCCGCGCA CAACCCCACC
CTCAGCGAGC TGTATCGCTA TTTTTCCAGC ATCGTCGGCG CGCAATTGCG CCAGACCCTG
AACATCGTCC CCCGTCGACA GGAAGTCTTC GATTTGCACG TCGCCTTGCT TGAGGCTGTC
GAGCAGCGCG ATCCGGAGCG GGCCAAAGCC CTGTCGAGGC AGTTGATCAA TGAACCTTGA
 
Protein sequence
MSENSLLIKR SLVDQALDQL RQRITDGSWQ VGQRLPTEPE LCAELGISRN TVREAMRVLA 
FSGLIEIRQG DGSYLRAVVD PMDTLKALSK CSLDQARETR HILEVEAIGL AALRRTDEDL
VALHEALGVA GSHYHGDLDS YIRCDLVFHR RLVDAAHNPT LSELYRYFSS IVGAQLRQTL
NIVPRRQEVF DLHVALLEAV EQRDPERAKA LSRQLINEP