Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0941 |
Symbol | |
ID | 3715786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1093625 |
End bp | 1094488 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | secretion protein HlyD |
Protein accession | YP_346673 |
Protein GI | 77457168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT TTTTCAGCCT GCTCGCGACC CTGCTGGTGC TGGCCCTGGC GCTGTGGATC GGCCGCACGT TGTGGGAGCA CTACATGAAC ACCCCGTGGA CCCGCGACGG CCGGGTGCGC GCCGACATCA TCAATGTTGC CGCCGACGTC ACCGGTGAAG TGGTCGACGT GCCGGTCCGC GACAACCAGT TGGTGAAGAA AGGTGATCTG CTGATGCAGA TCGACCCCGA GCACTACCGC CTGGCGGTGA AACAGGCGCA GTCGCTGGTC GCTTCGCGCA AGGCCACGTG GGAGATGCGC AAGGTCAACG CCCATCGCCG CGCCGACCTC GATAACCTGG TGATCTCCAA GGAAAACCGC GACGACGCCA GCAACATCGC CGACTCCGCA CTGGCCGATT ACCAACAGGC CCAGGCGCAA CTGGAAGCGG CCGAACTCAA CCTCAAACGC ACCGAAGTGC GCGCGGCGGT GGACGGCTAC GTGACCAACC TCAACGTCCA TCGCGGCGAT TACGCTCGTA TTGGCGAAGC GAAAATGGCC GTGGTCGACA TGAACTCGTT CTGGGTCTAT GGCTTCTTCG AAGAAACCAA ACTGCCTCAC GTGCGGGTCG GCGATAAAGC GGATATGCAA CTGATGAGCG GCGAAGTCCT CAAGGGCCAT GTGGAAAGTA TTTCCCGTGG TATCTACGAC CGTGACAACC CGGAAAGCCG CGAGCTGATT GCCGATGTGA ACCCGACCTT CAATTGGGTG CGCCTGGCGC AACGGGTGCC GGTGCGGATT CACATCGATG AAGTGCCGGA GGGTGTGTTG CTGGCGGCGG GGATTACCTG CACCGTTGTT GTGAAGCAGG ACGTTGTCGA GTAA
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Protein sequence | MKKFFSLLAT LLVLALALWI GRTLWEHYMN TPWTRDGRVR ADIINVAADV TGEVVDVPVR DNQLVKKGDL LMQIDPEHYR LAVKQAQSLV ASRKATWEMR KVNAHRRADL DNLVISKENR DDASNIADSA LADYQQAQAQ LEAAELNLKR TEVRAAVDGY VTNLNVHRGD YARIGEAKMA VVDMNSFWVY GFFEETKLPH VRVGDKADMQ LMSGEVLKGH VESISRGIYD RDNPESRELI ADVNPTFNWV RLAQRVPVRI HIDEVPEGVL LAAGITCTVV VKQDVVE
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