Gene Pfl01_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0939 
Symbol 
ID3715784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1091232 
End bp1093424 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content65% 
IMG OID 
Productfusaric acid resistance protein region 
Protein accessionYP_346671 
Protein GI77457166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCT TGCCCGCACC TTTGCGCTGG CTCTACTCCC TGGAATGGCG CCGGGGTTTC 
TTCGACTGGG CGCGCAGCGA CGGCGTGACC TGGGTCTACA TCTTCAAGGT GTTGATTGCC
GCATTCCTGA CCCTGTGGCT GGCGATGCGC CTGGAACTGC CGCAACCGCG CACGGCGATG
ATCACCGTGT TCATCGTCAT GCAGCCGCAG AGCGGCCAGG TGTTCGCCAA GAGCTTCTAT
CGCTTCCTCG GCACCCTGGC CGGGTCGGCG ATGATGGTCA CGCTGATTTC GCTGTTCGCC
CAGAACACTG AACTGTTCCT CGGCTCGCTG GCGATCTGGG TCGGCATCTG CTCGGCCGGC
GCCGCCCGTT GCCGCAACTT CCGCGCCTAC GGTTTTGTGC TGGCCGGCTA CACGGCGGCG
ATGGTCGGTT TGCCGGCGCT CGCCCATCCC GACGGTGCGT TCATGGCGGC GGTGTGGCGG
GTGCTGGAAA TTTCGCTGGG GATTCTCTGC TCGACCCTGG TCAGCGCCGC GATCCTGCCG
CAAACCGCCA GCGCCGCGAT GCGCAACGCC TTGTATCAGC GCTTTGGTGT GTTCGCGTTG
TTCGTCACCG ATGGCCTGCG CGGACGCAGC AAGCCGGAGG CGTTCGAGGC GAGCAACGTG
CGCTTCATCG CCGAAGCGGT CGGGCTGGAA GGGCTGCGCA GCGTGACCGT GTTCGAAGAC
CCGCACATGC GCCGGCGCAA CGGTCGCCTC AGTCGCCTGA ACAGCGAGTT CATGGGCATT
ACCACCCGGT TCAACGCCTT GCATCAGTTG CTCGAGCGCC TGCGCCGCAA CGGTGCCGAC
CATGTGGAAG CGGCGATCAA ACCGGGTCTG CAGGATCTGG CCGAAGTGCT CGACGGCTTC
AGCGGGCGTG CCCTGACCAG CCCGGATGCG GCGCGTCTGG TGCTGGCGCT GGCGGCGTAC
AAGGAAGGCT TGCCGGCGCG GGTGCGCAGC CTGCGGGCGC TCTTTCAGGA GAGCGAGCCG
AGCGACGCCG AGCAGCTGGA TTTCCACACT GCATACGAGT TGCTCTATCG CTTCGTCGAT
GACCTGCACA GTTATGCACA GACCCACGCT TCGCTCGCCG ATCACCGCCA CGAACGCGAG
CGCTGGGATG AGCCGTTCAC CCCGCAAACC AGTTGGTGGG CCGCAGCGGC TTCGGGGATT
CGTGCGTCAT TCATCCTGAT CGTGCTCGGC AGTTACTGGG TCGCCACCGC GTGGCCGAGC
GGCGCGACCA TGACCCTGAT CGCCGCCGCC ACCGTGGGCC TGTCGGCGGC GACGCCGAAC
CCAAAACGCA TGGCGTTCCA GATGGCCTGC GGCACGTTCC TCGGAGCGCT GATCGGCTTC
GTCGAGATGT TTTTCATCTT CCCGTGGATC GACGGTTTTC CGCTGCTGTG CGTGATGCTC
GCGCCGGTGA TCGTGCTCGG CTCGTTCCTC ACCTCGCGGC CGCAATACGC CGGTGTCGGT
CTCGGCCTGC TGATCTTTTT CAGCACCGGT TCGGTGCCGG ACAACCTGAC GATCTACAAC
CCCTACACCT TCATCAACGA CTACATCGCC ATGGTCATGG GCATGCTGGT CTGCGCGGCG
GCGGGGGCGA TCATTCTGCC GCCGAACAGC CGCTGGTTGT GGCAGCGCCT GGAGCAGGAC
CTGCGCGGGC AAGTGGTGTA CGCCATCAGC GGCAAGCTCA AGGGGCTGGC GTCGAGTTTC
GAAAGCCGTA CCCGCGACCT GATGCATCAG GCTTATGGCC TGGCGGCCGG TCAGCCGCTG
GTGCAGAAAA ACCTGCTGCG CTGGATGTTC GTGGTGCTGG AAGTCGGCCA CGCGATCATC
GAGCTGCGCA AGGAACAGGC GATCCTGCCG GTGCATCCGG CGTATGCCGA ATCGCAGCCA
TGGCGTCAGG CGATCCGGGT CATGGGGCGT TCGCTGGTGC GACTGTTCCT GCAACCGAAT
TCGAGCAATC TGGAACGTGC ACTGGTCGCG GTCGATCACG CGATCAGCCG GGTTGCCGCC
ACTGACGAGC CGTTTGCACC GCACTTCGAT ACCTCGGCGC TGCGGCGGGT GAAAAGCTAC
CTGCACTTCA TTCGCACCTC GTTGCTCGAC CCGCAATCGC CCCTTGCTGC CTACGCCATC
GCCAAGCCCG AAGGACTTGC CCATGCCTCG TGA
 
Protein sequence
MTPLPAPLRW LYSLEWRRGF FDWARSDGVT WVYIFKVLIA AFLTLWLAMR LELPQPRTAM 
ITVFIVMQPQ SGQVFAKSFY RFLGTLAGSA MMVTLISLFA QNTELFLGSL AIWVGICSAG
AARCRNFRAY GFVLAGYTAA MVGLPALAHP DGAFMAAVWR VLEISLGILC STLVSAAILP
QTASAAMRNA LYQRFGVFAL FVTDGLRGRS KPEAFEASNV RFIAEAVGLE GLRSVTVFED
PHMRRRNGRL SRLNSEFMGI TTRFNALHQL LERLRRNGAD HVEAAIKPGL QDLAEVLDGF
SGRALTSPDA ARLVLALAAY KEGLPARVRS LRALFQESEP SDAEQLDFHT AYELLYRFVD
DLHSYAQTHA SLADHRHERE RWDEPFTPQT SWWAAAASGI RASFILIVLG SYWVATAWPS
GATMTLIAAA TVGLSAATPN PKRMAFQMAC GTFLGALIGF VEMFFIFPWI DGFPLLCVML
APVIVLGSFL TSRPQYAGVG LGLLIFFSTG SVPDNLTIYN PYTFINDYIA MVMGMLVCAA
AGAIILPPNS RWLWQRLEQD LRGQVVYAIS GKLKGLASSF ESRTRDLMHQ AYGLAAGQPL
VQKNLLRWMF VVLEVGHAII ELRKEQAILP VHPAYAESQP WRQAIRVMGR SLVRLFLQPN
SSNLERALVA VDHAISRVAA TDEPFAPHFD TSALRRVKSY LHFIRTSLLD PQSPLAAYAI
AKPEGLAHAS