Gene Pfl01_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0833 
Symbol 
ID3715489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp981213 
End bp982274 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content65% 
IMG OID 
ProductK+-dependent Na+/Ca+ exchanger protein 
Protein accessionYP_346565 
Protein GI77457060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.168882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAT TGCTCAGCGG GCTGTTCCTG CTGATCGCCG GCGCCGAGCT GATGGTGCGC 
GCCGCCGTGC GCCTGGCCGC GCGTCTGCAT GTCCGACCGC TGATCATCGG CCTGACCATC
GTCGCCCTCG GCAGCAGCGC TCCGCAAATG GCCGTCAGCC TGCAAGCCGT ACAGGCGCAC
ACGCCGGACA TCGCCGTCAG CAGCGTGATC GGCAGCAGCA TTTTCAACAT TCTCGTCACC
CTCGGCCTGT CGGCGCTGAT CATTCCGCTG CGGGTATCGC GGCAATTGGT GCGCCTCGAC
ATTCCACTGA TGATCGGTGC CAGCCTGCTG GTGTTCGTCC TGGCATGGAA TGAAGAGCTC
GGGCGCTTCG ACGGCATTCT GTTGCTCGGC GCCCTCGCCC TGTATCTCGG ATTATTGCTG
CGCCAGTCGC GGCACTCGGC CCGCCCGCAC TCCGATCAAC CCCACGATCC GCAGGCCCCA
TGGTTCACCA GCCTGCTGAT GATTGTCGGC GGTCTGGGCA TGCTGGTGTT CGCCGGGCAT
CTGCTACTGG GGGCGGCCGT GGTGGTGGCC ACCGACCTGG GGTTCTCCGA GCGGGTGATC
GGCCTGACCG TGGTCGCGGT CGGCACCTCG CTGCCGGAAC TCGCCACCTC GCTGATCGCT
GCGTTGCGCG GTCAGCGGGA CATCGCCGTG GGCAACGTGA TCGGTGCCAA CCTGTTCAAC
CTGCTTGGGG TGCTGGGCCT CACCGCACTG ATCGCGCCGA CGCCGCTGTC GGTCTCGCCG
AACGCACTGG ATTTCGACCT GCCGGTGATG CTCGGCGTCG CCGCGCTGTG CCTGCCGGTG
TTCTATTCCG GTTACCGCGT GACCCGGGCC GAAGGCCTGT TGCTGCTGGG TTTGTACCTG
GCGTACGGGC TGCACGTGGT GTCGTTCACC ACCGGCATGC CACTGGCCGG CAAACTCGAG
CGATTGATGC TGTTTTATGT GCTGCCGACG CTGCTGGCGT TTCTGTTTTT CACGTCCGTG
CGCGCCTGGC GCCGCCAACA CCACAAGAGG GATATGCCAT GA
 
Protein sequence
MIELLSGLFL LIAGAELMVR AAVRLAARLH VRPLIIGLTI VALGSSAPQM AVSLQAVQAH 
TPDIAVSSVI GSSIFNILVT LGLSALIIPL RVSRQLVRLD IPLMIGASLL VFVLAWNEEL
GRFDGILLLG ALALYLGLLL RQSRHSARPH SDQPHDPQAP WFTSLLMIVG GLGMLVFAGH
LLLGAAVVVA TDLGFSERVI GLTVVAVGTS LPELATSLIA ALRGQRDIAV GNVIGANLFN
LLGVLGLTAL IAPTPLSVSP NALDFDLPVM LGVAALCLPV FYSGYRVTRA EGLLLLGLYL
AYGLHVVSFT TGMPLAGKLE RLMLFYVLPT LLAFLFFTSV RAWRRQHHKR DMP