Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0558 |
Symbol | |
ID | 3712953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 652542 |
End bp | 653447 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | cation efflux protein |
Protein accession | YP_346291 |
Protein GI | 77456786 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000438262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.603969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTAACC GAGGTGAGCA GTCGCTGCTC AAACAATCGA CCATCCTGAT GTTCGCCGTG TCGATCGCCG GGATCGCCAC CGGTTTTGTT TCGGGTTCCC AGTCCATCCT GTTCGATGGT TTTTTTTCGT TGATTGCAAC GTTCATCAAA GTCCTGATGC TGATCACCGC GAAGCTGATC GCCAAGCAAA GCAACCAGCG TTTCCAGTTC GGTTTCTGGC ATCTGGAGCC GATGGTGCTG TTGATCGAGG GCAGTTTTCT GTTGCTGATC GCGATCTACG CGTTTCTCAA CGGTGTGTTC GGCATCATCA ACGGCGGTCG TGAAATCGAG CTGGGGCTGG TGATCATCTA CGCGGCGGTG TTCACCGTTG TCGAGTTCGC CTACTTCTTC TACGTGCGCC ACCGTAATCG CAAGTTCAAG TCGAGCCTTA TCCAGTTCGA CAACATCAGC TGGCTTGTAG ACGCGATGCT GTCGGTGGGC CTGTTGATCA GTTTTCTCGC GGCGCTGCTG CTCAAGTCCC AGGGCTATGG CGAGTGGGCG AAATTTGTCG ACCCGCTGAT TCTCATCGTG CTGGCCCTGA CCATGCTGCC GCCGGCCTTC AAGATCCTCG GCCCGGCGCT GCGGGACGTA CTCGGTATTG CGCCGGACAC GCTGGACGAT CAGGTGCGCC AGGTGATGGA TGCGGCCAAG GTCGAGCATG GTTTCGACGA CTACGTGTCC TACGTGCAGA AGCACGGGCG GGCGCGGTTC ATCGAAATTC ATGTGGTGTT GCCGGCGAAT TACCGGCTGC AGAGCGTCGG TCAGCTGGAT GTGCTGCGTG AGGAGATTTC CGCGAAGCTG GGCAAACCGG ATGCGGCGCG CTGGCTGACC ATCAGCTTCA CCGGCGACAG GAAGTGGATT GCCTGA
|
Protein sequence | MSNRGEQSLL KQSTILMFAV SIAGIATGFV SGSQSILFDG FFSLIATFIK VLMLITAKLI AKQSNQRFQF GFWHLEPMVL LIEGSFLLLI AIYAFLNGVF GIINGGREIE LGLVIIYAAV FTVVEFAYFF YVRHRNRKFK SSLIQFDNIS WLVDAMLSVG LLISFLAALL LKSQGYGEWA KFVDPLILIV LALTMLPPAF KILGPALRDV LGIAPDTLDD QVRQVMDAAK VEHGFDDYVS YVQKHGRARF IEIHVVLPAN YRLQSVGQLD VLREEISAKL GKPDAARWLT ISFTGDRKWI A
|
| |