Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0458 |
Symbol | |
ID | 3712853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 525178 |
End bp | 526017 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_346191 |
Protein GI | 77456686 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0983546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTATC GTCACGCCTT CCATGCCGGC AATCACGCCG ATGTGTTCAA ACACCTGACC TTGACCCGCC TCATCGCCCT GATGTCGCGC AAGGAGCAGC CGTTTGCCTA TCTCGACAGC CACGCCGGCA TCGGTCTGTA TGACCTGCAG GGTGATCAGG CGAATCGTAC CGGCGAGTAC CTGGAAGGCA TCGCGCGGTT GTGGGACCAG CCGGATCTGC CGGCGCTGAC CGCGGACTAC ATGAACGTGC TGCACGAGAT GAACCCGGAC GGCCAGTTGC GCTACTACCC GGGTTCGCCG GAACTGGCGC GGCGTCTGAC CCGTTCCCAG GATCGCGTGC TGCTCAACGA GAAGCACCCG GAAGACGGCG TGCTGCTCAA GGACAACATG AAGGGCGACC GCCGTGTGGC CGTGCATCTG GGTGAGGGCT GGCATGTGGC GCGGGCGTTG CTGCCGGTGG CCGAGAAGCG TGCGGTGATG CTGATCGATC CGCCGTTCGA GAAGCTCGAC GAGATGCAGC GTTGTGCGGC GTCGCTGAGA GAGGCGATCT CGCGGATGCG CCAGACCGTC GCGGCCATCT GGTATCCGGT GAAGGATCAG CGCGCATTGC GTCGTTTCTA TCAGGATCTG GCCGGCACCG GTGCGCCGAA GTTGCTGCGG GTCGAGTTGC TGGTGCATCC ACTGGATACG CCGAACAGCC TTAACGGCTC TGGCCTGGCG ATTGCCAATC CGCCGTGGGG GCTGGAGGAA GAATTGCGTG AGCTGCTGCC GTGGTTGTCC AAGAAACTGG GCCAGACCCA GGGTGGGTGG CAGATGGATT GGTTGATCGC CGAAAGCTGA
|
Protein sequence | MNYRHAFHAG NHADVFKHLT LTRLIALMSR KEQPFAYLDS HAGIGLYDLQ GDQANRTGEY LEGIARLWDQ PDLPALTADY MNVLHEMNPD GQLRYYPGSP ELARRLTRSQ DRVLLNEKHP EDGVLLKDNM KGDRRVAVHL GEGWHVARAL LPVAEKRAVM LIDPPFEKLD EMQRCAASLR EAISRMRQTV AAIWYPVKDQ RALRRFYQDL AGTGAPKLLR VELLVHPLDT PNSLNGSGLA IANPPWGLEE ELRELLPWLS KKLGQTQGGW QMDWLIAES
|
| |