Gene Pfl01_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0393 
Symbol 
ID3712479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp445947 
End bp446801 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID 
ProductPoly(3-hydroxyalkanoate) depolymerase 
Protein accessionYP_346126 
Protein GI77456621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.208502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACC CGTTCATCTT TCGAACTGTC GAGCTGGATG GCCAGACCAT CCGCACGGCG 
GTCCGCCCCG GCAAGCCTCA CTTGACGCCC TTGCTGATAT TCAACGGCAT CGGCGCCAAC
CTGGAGCTGG TGTTTCCTTT TGTCGCGGCG CTGGATCCGG ATCTGGAAGT GATCGCCTTC
GACGTGCCCG GTGTCGGCGG TTCCTCGACG CCGAGCCGGC CGTATCGCTT TCCGGGGCTG
GCGAAGCTCA CCGCGCGGAT GCTCGATTAC CTCGACTACG GACAGGTCAA CGTGATCGGC
GTGTCCTGGG GTGGCGCGCT GGCGCAACAG TTCGCCTACG ACTATCCCGA GCGCTGCAAG
AAGCTGGTGC TGGCGGCGAC CGCTGCCGGT GCGGTGATGG TGCCTGGCAA GCCGAAAGTG
CTGTGGATGA TGGCCAGCCC ACGGCGCTAC ATCCAGCCGT CACATGTGAT CCGCATTGCC
CCGATGATCT ACGGCGGCTC GTTCCGCCGC GACCCGACAC TCGCCGCCAG CCATGCGGCC
AAGGTGCGCT CGGCGGGCAA GCTCGGTTAC TACTGGCAAC TGTTCGCGGG CCTGGGCTGG
ACCAGCATTC ACTGGCTGCA CAAGATCCAC CAGCCGACCC TGGTGCTGGC CGGTGATGAC
GATCCGCTGA TCCCGCTGAT CAACATGCGC ATGCTCGCCT GGCGAATCCC CAACGCGCAG
CTGCACATCA TCGACGACGG GCATCTGTTC CTGATTACCA GGGCCGAGGC GGTGGCGCCG
ATCATCATGA AATTCCTCCA GGAGGAACGT CAGCGTGCGG TGATGCATCC GCACCCGACA
CCGCTGGGCG GATAA
 
Protein sequence
MPHPFIFRTV ELDGQTIRTA VRPGKPHLTP LLIFNGIGAN LELVFPFVAA LDPDLEVIAF 
DVPGVGGSST PSRPYRFPGL AKLTARMLDY LDYGQVNVIG VSWGGALAQQ FAYDYPERCK
KLVLAATAAG AVMVPGKPKV LWMMASPRRY IQPSHVIRIA PMIYGGSFRR DPTLAASHAA
KVRSAGKLGY YWQLFAGLGW TSIHWLHKIH QPTLVLAGDD DPLIPLINMR MLAWRIPNAQ
LHIIDDGHLF LITRAEAVAP IIMKFLQEER QRAVMHPHPT PLGG