Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0379 |
Symbol | |
ID | 3712642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 435130 |
End bp | 435837 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_346112 |
Protein GI | 77456607 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.744175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.123252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC TGCTGCTCGA AGAGGCCGAC TTCATTGCGG CCGACCGCGT CGTGCTGCGT GATCGGCGCC TGACCCACAT GCAGGAAGTC CACCGTTCGG AAGTCGGCGA CAGCCTGCGG GTCGGGTGCA TTGGCGGGCT GATGGGCTCG GCCGAGCTTT TGCGCCTTGA CGCGGGCGAA GCCGAGCTGC GAGTCAACCT CGATCAACCG CCACCGGCCA AACTGCCGCT GACCCTGGTG CTCGCCCTGC CCCGCCCGAA GATGCTGCGC CGGGTGTTCC AGACCGTGGC GACCATGGGC GTGTCGAAGG TGATTCTGGT CAACAGCTAC CGGGTCGAGA AAAGCTTCTG GCAGACGCCG TTCCTCGAAC CGGACGCCAT CCGCGAACAA CTGATCCTCG GCCTCGAACA GGCTCGGGAT ACGGTGCTGC CGGAGATCAT CATCGAGAAG CGCTTCAAGC CGTTCGTCGA AGATCGCCTG CCGGCCATCA CCGACGGCAC CCTCGGTCTG GTCGGTCATC CGGGCAACTT CCCGCCCTGC CCCCGCGCCC TGAACGAACC GGTGACCCTG GCCATCGGCC CCGAGGGTGG CTGGATTCCC TACGAAATCG ATCTGCTGGC CAAGGCCGGG CTGCAACCGG TGCAACTGGG CGAGCGAATC CTGCGGGTCG AAACCGCCGT CACCGCGCTG CTCGCCCGGC TGTTCTGA
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Protein sequence | MNLLLLEEAD FIAADRVVLR DRRLTHMQEV HRSEVGDSLR VGCIGGLMGS AELLRLDAGE AELRVNLDQP PPAKLPLTLV LALPRPKMLR RVFQTVATMG VSKVILVNSY RVEKSFWQTP FLEPDAIREQ LILGLEQARD TVLPEIIIEK RFKPFVEDRL PAITDGTLGL VGHPGNFPPC PRALNEPVTL AIGPEGGWIP YEIDLLAKAG LQPVQLGERI LRVETAVTAL LARLF
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