Gene Pfl01_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0171 
Symbol 
ID3717521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp205566 
End bp207629 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content64% 
IMG OID 
Productfusaric acid resistance protein region 
Protein accessionYP_345904 
Protein GI77456399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGGT TCTTTTCCGG CATGCCCCCC GCGCGGGACT GGTTCTACGG GATCCGCACG 
TTCGCGGCCT CGATGACCGC GCTGTACATC GCCTTGCTCA TGCAGATGCC GCGTCCGTAC
TGGGCGATGG CCACGGTGTA CATCGTTTCC AGTCCGTTCC TCGGCCCGAC CAGTTCCAAG
GCGCTGTATC GGGCGATCGG CACGTTTCTC GGTGCAGCGG CGGCGGTGCT GTTCGTGCCG
ATGTTCGTCC AGAGCCCGTA CGTGCTGGTG GTGGTCATCG CCTTGTGGAC GGGGATTCTG
CTGTTCCTGT CCCTGCACCT GCGCACCGCC AACAACTACG CGCTGATGCT GGCCGGCTAC
ACCTTGCCGT TGATCGCTCT ACCGGTGGTG GATAACCCGC TGGCGGTGTG GGACGTGGCC
GAGTCGCGAA CTGAAGAGAT CTTCCTCGGC ATCGCCGTGG CGGCGGTGGT CGGTGCGATG
TTCTGGCCAC GGCGCCTGGC ACCGGTGTTC AACGATGCCG TGGGCAAATG GTTCGCCGAC
GCCACGACCT ACAGCCTGAA ATTCCTCAGC CGCGACGTGC AGCCCGAAGC GGTCGCAGCC
CTGCGCATGG CAATGGTCGG CAGTTTCAAC AGCCTGGAAT TGATGATCGG CCAGTTGCCG
CACGAAGGTG CGCGTCCGCA GACGGTGCGC AACACCAAGG AACTGCGCGG GCGGATGATC
CACCTGCTGC CGGTGATCGA CGCCCTTGAA GACTCGCTTT ACGCCCTCGA ACGGCGCACG
CCCGAGCTGG TGGAAAAGTT CGCACCACTG CTCATCTCGA CCCGCGAATG GCTTGGCCAC
AAAGACGCCG ATCTGGAACG CTGGCAAGCG CTGCGGGATC AGCTCGAAGC GCTGCAACCG
AGCGCCGAAG CCCTCGAAGA TCGCAAGCAG TTGCTGTTTT CCAACGCGCT GTATCGCCTC
GGCGAGTTCA TCGATCTGTG GCAGGACTGC CGCAGCCTGC AGGACGCAAT CCTGTGCGAG
CGCCAGGACA GCTGGCGCGC GGTCTATCGT CACTGGCGCC TCGGTCGCCT GACGCCATTC
ATCGACCGCG GGCTGATGTT GTATTCGGTG GCCTCGACCA TCCTGGCGAT CATCGTCGCT
TCGGTACTGT GGATCCTGCT GGGCTGGACC GACGGCGGCA GCGCGGTGAT TCTGGCGGCG
GTGTCGTGCA GTTTCTTCGC CTCGATGGAC GACCCGGCGC CGCAGATCTA CCGGTTCTTT
TTCTGGACCG GGATGTCGGT GCTGTTCGCC AGCCTGTACC TGTTTCTGGT GTTGCCGAAC
CTGCATGACT TTCCGATGCT GGTGCTGGCG TTCGCGGTGC CGTTCATCTG TGTCGGCACC
CTGACGGTGC AGCCCCGTTT CTACCTCGGC ATGCTGCTGA CGCTGGTCAA CACCTCGTCG
TTCATCAGTA TTTCCGGTGC TTACGACGCG GACTTCTTTG CCTTCGTCAA TTCCAACCTG
GCGGGCCCGA TTGGGTTGTT GTTCGCGTTT ATCTGGACCC TGATCGCCCG GCCGTTCGGC
GCCGAACTGG CGGCCAAACG CCTGACCCGT TTCAGCTGGA AAGACATCGT CAGCATGACC
GAACCGGCGA ACCTCGCCGA ACATCGACAA CTCGGCGTGC AATTGCTCGA CCGCCTGATG
CAGCACCTGC CGCGTCTGGC GCTGACCGGG CAGGACACCG GCATCGCCAT GCGCGAAGTG
CGCGTGGGGC TGAACCTGCT CGACCTGCTC GCCTATACGC CGCGAGTGAC GGGCGCGCCG
AACGCGCTGC TCAAGCAAGT AGTGGCTGAG GTTGGCGAGT ATTTCCGGGC CTGTCTCAAG
GCCGGGGAAC GCCTGCCGGC GCCGAGCGCC CTGCTGATGA CCATGGATCG CACCCGCCGT
GCGCTCAGCG GCCACGGCGA TGAAGACACC CGACTCAACC TGTTGCATGC CTTGAGCGGT
TTGCGCCTGG CGCTGTTGCC CGGCGTGGAA TTCGTTTCCA ACGCAGAGCC CGAAGAACCG
CTGCCCGAAG GAGCGCCCCT ATGA
 
Protein sequence
MNGFFSGMPP ARDWFYGIRT FAASMTALYI ALLMQMPRPY WAMATVYIVS SPFLGPTSSK 
ALYRAIGTFL GAAAAVLFVP MFVQSPYVLV VVIALWTGIL LFLSLHLRTA NNYALMLAGY
TLPLIALPVV DNPLAVWDVA ESRTEEIFLG IAVAAVVGAM FWPRRLAPVF NDAVGKWFAD
ATTYSLKFLS RDVQPEAVAA LRMAMVGSFN SLELMIGQLP HEGARPQTVR NTKELRGRMI
HLLPVIDALE DSLYALERRT PELVEKFAPL LISTREWLGH KDADLERWQA LRDQLEALQP
SAEALEDRKQ LLFSNALYRL GEFIDLWQDC RSLQDAILCE RQDSWRAVYR HWRLGRLTPF
IDRGLMLYSV ASTILAIIVA SVLWILLGWT DGGSAVILAA VSCSFFASMD DPAPQIYRFF
FWTGMSVLFA SLYLFLVLPN LHDFPMLVLA FAVPFICVGT LTVQPRFYLG MLLTLVNTSS
FISISGAYDA DFFAFVNSNL AGPIGLLFAF IWTLIARPFG AELAAKRLTR FSWKDIVSMT
EPANLAEHRQ LGVQLLDRLM QHLPRLALTG QDTGIAMREV RVGLNLLDLL AYTPRVTGAP
NALLKQVVAE VGEYFRACLK AGERLPAPSA LLMTMDRTRR ALSGHGDEDT RLNLLHALSG
LRLALLPGVE FVSNAEPEEP LPEGAPL