Gene Pfl01_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0146 
Symbol 
ID3717496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp175893 
End bp177212 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345879 
Protein GI77456374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCC CGGTGAGCGG CGCCGCCGAG CAGGTGTTCG CGCGGTTTCT CGATCTCGAA 
CGGCAGACCC GCGCCGCTCA TGATATTTCG CAACTGGCCT ACAGCCTGGT CAATGACGGT
CAGTCGCTGT TCGGTTTTCG CCATGCGGCG CTGTTGATCG CCGGCAAGGT GCAGGCGGTG
ACCGGGGTCA GCGCAGTGGA GCCGAATGCG CCGTTCGTGG CATTCGTCGA GCAGGCCGTG
GCGCAGTTGT TCAAGCAGGA TGTGCTGAAA CAGGCGCGGG TGATCACGCC GGAAATGGTC
GGTGAATCGA TTCAGGCCGA CTGGCGCAGT CTGTCGGCCA TGCAAGTGTT CTGGCTGCCG
TTGATCGACC GTCAGGGTCA GGTGTTCGGC GGTTTGTGGC TGGCCCGTGA TCTGCCGTGG
AACCCTTCCG AACAAGTGCT GCTGTCGCAA CTGGGCGACA CCTACAGCCA CGCCTGGCTG
GCGTTGCAAC CACGCAAGCC GTGGCGCTTG CGCTGGACCC GCAAACGTCA GGTGGCGCTG
GTCGCCGTGT TGTTGCTCGG GCTGTTGATC CCGGTGCGCC AGTCGGTGCT GGCGCCCGCC
GAAGTGGTGC CTCAGGGCGG GCGGGTTGTC GCCGCACCGC TGGACGGGGT GATCGCCGAG
TTTCTGGTCA AACCCAACCA GAGTGTGAAA ACCGGCGACC TGTTGCTGCG TTTTGAAAGC
ACGACGCTGA AGGCTCAGGC CGATGTCGCC GAGCGTGCAC TCGGGGTCGC CGAAGCGGAA
CTCAAAGCCA ATTCCCAGCG CTCGTTCGTT GATGCCGAAT CCAGCTCCCG GGTCGATCTG
CTGGCCGCCC GCGCCGAACA GAAACGCGCC GAACGCGACT ACGCCCGCGA ACTGCTCAAC
CGCAGCGAAG TGCGCGCCGA GCGCGACGGC ATTGCGGTGT TCGCCGATGC CGAGCGCTGG
ACCGGCAAAC CAGTGCAGAC CGGCGAACGG CTGATGGAAA TCGCCGACCC GAGCCAGGCC
GAACTGCGCA TCGAACTAGC CGTGGGCGAC GCGATCTCGC TGGAGCCGGG CGCCGAAGTC
GCGCTGTTTC TCGACAGCGA CCCGTTGCAA CGCCACCTCG CCACCCTCGA GCGTTCCGCT
TACGAGGCAC AGCCCACCGC CGGCGGCCAG TTGGCCTATC GGCTGGACGC CAATTTCGCC
GACGCCCCGC CGCGTATCGG CCTGCGCGGC ACCGCAAAAA TTTTCGGCGA GCGTGCGCCG
CTGGCACTGT ACCTGCTGCG GCGTCCGCTC GCCGGACTGC GCCAGAGCGT AGGTCTGTAA
 
Protein sequence
MNAPVSGAAE QVFARFLDLE RQTRAAHDIS QLAYSLVNDG QSLFGFRHAA LLIAGKVQAV 
TGVSAVEPNA PFVAFVEQAV AQLFKQDVLK QARVITPEMV GESIQADWRS LSAMQVFWLP
LIDRQGQVFG GLWLARDLPW NPSEQVLLSQ LGDTYSHAWL ALQPRKPWRL RWTRKRQVAL
VAVLLLGLLI PVRQSVLAPA EVVPQGGRVV AAPLDGVIAE FLVKPNQSVK TGDLLLRFES
TTLKAQADVA ERALGVAEAE LKANSQRSFV DAESSSRVDL LAARAEQKRA ERDYARELLN
RSEVRAERDG IAVFADAERW TGKPVQTGER LMEIADPSQA ELRIELAVGD AISLEPGAEV
ALFLDSDPLQ RHLATLERSA YEAQPTAGGQ LAYRLDANFA DAPPRIGLRG TAKIFGERAP
LALYLLRRPL AGLRQSVGL