| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3096 |
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| Symbol | |
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| ID | 8531505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3373199 |
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| End bp | 3374368 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003260445 |
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| Protein GI | 261822339 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGGAA ATATAAAAGC GCTGATTTTG GCATTATCTG CATTTACCTG CGTGGCCAGC
GCACAGTCTA TTAATATTGA AGTGCTAAGT GCGACGGTTA AAGATAAAAA GATTGATGAT
GCAACGGTTA TTCTACAGAA AAACGGTGCG CAGTCAGTGA CCACACGCTC TGATGCCGCA
GGCCGTGCGG CGCTCAACGC GCCATTCAGT GTCGATCAAG ACAGTCTGTT GATCATTAAA
AAAGAAGGGT ATTCCGATCT GGTGGTTAAA TGCCCGTGTG ACGGAATGAC CTATGCAGTT
AGCCCAGTAA TGAAAAGCCT GGATGGCATG CGAATTGTAT TAACCTGGGG CGAAAAACCT
TTTGATTTAG ATTCCCACCT TATTTATCCG GGTAATCATA TTTATTTCAG CCACAAAAAA
GGACGCGATG CTAATCTTGA TGTCGATGAT ACAGATAGTT TCGGCCCAGA AACGATCACG
ATTGATAAAA AGCGTTTAGG TGAAAGTTAT ATTTATGCCG TCCATGATTA TTCAAATGGT
GATAAGGCTA ATTCATTAGC GCTTTCCGCA AGTAGTGCAA AAGTATTTGT CTATGTTGGA
AGCTCGCAGG TACGTTCATA TTCCGTCCCA CTGAATAAGA CAGGGAATAT CTGGACGGTT
TTCCGTCTTA ACCCTAACGG TGACTTTGAA GATATCAATG CCGTTGGCGA GGCTGATTTC
TCAAAAGCGA AAGATGGTAA TGCGCTGCCA ATGGTGCTTA ACCCGGCGCA GACGGCAGTT
TCCGTTACTG GGAATACCGC GCTGGCAAAA AGCCTCAATC GCGACGGTGA AGCCGCCTAT
GGGCGGGGTG AGCTAGAGCA GGCCACAACG TTGTTTCTGG CCGCGATCGA TCAGGACAGC
GCGTTTGGCC AGGCATATAG CAACCTGGGT CTGGCCTATC AAAAGCGCGG CAATATTGCC
GAAGCTATTT GGGCCAACCG TAAAGCGATT GCGCTGGCAA ATGGTAGCAA TGCGGCAACC
ACGCGTGCCA GCTCGTACTA CAATATTGCA AAAATTTACG AGAATGCGGG TCAGTTCAGC
GATGCACTTC AGCATTATGA GCTTGCAAGA AGCCAGAAAA GTAACACGGT TTACGATAAA
GCCATTGAAC GGATGAACGC GAAGAAGTAA
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| Protein sequence | MKGNIKALIL ALSAFTCVAS AQSINIEVLS ATVKDKKIDD ATVILQKNGA QSVTTRSDAA
GRAALNAPFS VDQDSLLIIK KEGYSDLVVK CPCDGMTYAV SPVMKSLDGM RIVLTWGEKP
FDLDSHLIYP GNHIYFSHKK GRDANLDVDD TDSFGPETIT IDKKRLGESY IYAVHDYSNG
DKANSLALSA SSAKVFVYVG SSQVRSYSVP LNKTGNIWTV FRLNPNGDFE DINAVGEADF
SKAKDGNALP MVLNPAQTAV SVTGNTALAK SLNRDGEAAY GRGELEQATT LFLAAIDQDS
AFGQAYSNLG LAYQKRGNIA EAIWANRKAI ALANGSNAAT TRASSYYNIA KIYENAGQFS
DALQHYELAR SQKSNTVYDK AIERMNAKK
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