Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2838 |
Symbol | |
ID | 8531242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3103413 |
End bp | 3103937 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | isochorismatase hydrolase |
Protein accession | YP_003260198 |
Protein GI | 261822092 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0102988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGATTT TACTCGTCAT TGATATGCAG AATGCCGTGT TTGCAACGCC GAGAGCGCGA CAGGCGCAGA CGGTCGCATT GATAAACCAA CTTTCAGGCG CAGCAGATCA GACGATTTTT ATTCAGCATG AAGAGGACGG TATGCTATCA GGCAGTGACG GATGGCAATT ATTACCTGAA CTCCATCAAC CCGAAGGCAG TTTGTTTGTC ACTAAAACGG CGTGCGATGC GTTTTATCGC ACGTCGTTAG CTGATGTGCT GGCTGAACGA AGTGTTAATC ACCTTACGAT CTGCGGATGT GCGACAGATT ATTGCGTTGA TGCGACTATT AAAAATGCTG CTAGCCGAGG CTATGCGTTG ACTATTGCCG CTGATGCACA CACGACAGCC AATCGTGGCG AACTGAAAGC AGAACAATTA ATCACGCATT ACAACGACGT GTGGCGGAAT TTTATTATTC CTGGTAACAC GATTACGCTA GCAACAACGG CGCACATCGT TGCTTCATGG AAGATGGATC GCTAG
|
Protein sequence | MQILLVIDMQ NAVFATPRAR QAQTVALINQ LSGAADQTIF IQHEEDGMLS GSDGWQLLPE LHQPEGSLFV TKTACDAFYR TSLADVLAER SVNHLTICGC ATDYCVDATI KNAASRGYAL TIAADAHTTA NRGELKAEQL ITHYNDVWRN FIIPGNTITL ATTAHIVASW KMDR
|
| |