| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2644 |
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| Symbol | |
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| ID | 8531045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2892272 |
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| End bp | 2893270 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003260007 |
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| Protein GI | 261821901 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00164635 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGT ATACCTACCC TGAATTTGGT GCCGGTTTGT GGCATTTTGC GAATTATATT
GACCGCTACG CGGTGGACGG CTACGGCCCG GCTTTGAGTA CGATCGATCA GATCAAAGCA
GCAAAAGAGG TCGGAGAGCT TTCCTACGTC GATCTGCCTT ATCCCTTCAC GCCGGGCGTC
ACACTCAGCG AAGTGAAGGA TGCGCTGAAG GATGCGGGTC TGAAAGCGAT TGGCATCACA
CCGGAAATTT ACCTGCAAAA GTGGTCGCGT GGCGCTTTCA CCAATCCCGA TCCGGCCGCG
CGGGCTGCGG CGTTTGAACT GATGCATGAA TCTGCTGGCA TTGTGCGTGA ACTGGGAGCG
AATTACGTCA AAGTCTGGCC GGGGCAGGAT GGCTGGGATT ATCCATTCCA GGTCAGCCAT
AAAAACCTGT GGAAGCTGGC GGTTGATGGT ATGCGCGATC TCGCTGGCGC TAACCCGGAT
GTGAAATTCG CCATCGAATA CAAGCCGCGC GAACCGCGTG TGAAAATGAC CTGGGATTCC
GCAGCGCGAA CGCTGCTGGG GATTGAAGAT ATCGGGTTAG ATAACGTTGG CGTGCTACTG
GACTTCGGCC ATGCGCTGTA TGGCGGTGAA TCACCAGCGG ATTCTGCCCA GTTGATTATC
GATCGCGGTC GGCTGTTCGG CATGGATGTG AATGACAATC TGCGCGGTTG GGATGATGAT
TTGGTGGTCG GTACGGTGCA CATGACCGAG ATTTTCGAGT TTTTCTACGT GCTGAAAATC
AACAATTGGC AGGGCGTGTG GCAGCTCGAT CAGTTCCCGT TCCGTGAGAA TCACGTCGAG
GCGGCGCAAC TGTCTATTCG TTTCTTGAAG CATATCTATC GTGCGCTGGA TAAACTGGAT
ATTCCGGCGC TTCAGGCGGC ACAGGAAGCG CAAAACCCGT TACAGGCTCA GCGGATTGTA
CAGGACGCGC TGCTGTCATC CATTAACGTT AGCGAGTAG
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| Protein sequence | MATYTYPEFG AGLWHFANYI DRYAVDGYGP ALSTIDQIKA AKEVGELSYV DLPYPFTPGV
TLSEVKDALK DAGLKAIGIT PEIYLQKWSR GAFTNPDPAA RAAAFELMHE SAGIVRELGA
NYVKVWPGQD GWDYPFQVSH KNLWKLAVDG MRDLAGANPD VKFAIEYKPR EPRVKMTWDS
AARTLLGIED IGLDNVGVLL DFGHALYGGE SPADSAQLII DRGRLFGMDV NDNLRGWDDD
LVVGTVHMTE IFEFFYVLKI NNWQGVWQLD QFPFRENHVE AAQLSIRFLK HIYRALDKLD
IPALQAAQEA QNPLQAQRIV QDALLSSINV SE
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