| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2503 |
|---|
| Symbol | |
|---|
| ID | 8530904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2713178 |
|---|
| End bp | 2714980 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | allophanate hydrolase |
|---|
| Protein accession | YP_003259871 |
|---|
| Protein GI | 261821765 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAA TGACGGGACT CACGCTTCAG GAATGGAAAC AGCATTACCA ACAGCAGGCC
GATAGCGTTG GCGAGACGTT AAGTTCACTG CTTGCTAGCC TGTCGGCGGA CGATCCGGCG
TGGATCGTGC TGGCGACACC TGAGCTGATT GAGGTGCAGA TCGCGGCGCT ATTACCGCGA
TATCGTGAAA ACCCAGACGC GCTGTCGCTG TTTGGCGTTC CCTTCGCTGT CAAAGACAAT
ATTGATGTTG CAGGCTGGCC GACGAGCGCG GCGTGTCCGG CATTCACCTA TCTGGCTGAC
AAGGATGCGA CTGCCGTTGC CAAATTAAAA GCGGCAGGGG CCATTGTCAT TGGTAAAACC
AATCTCGACC AGTTTGCCAC TGGGCTAGTC GGTACGCGCT CACCGTTTGG CGCAGTGCCG
AACACCTTTA ATACGGACTA TATCAGCGGC GGTTCCAGTT CAGGATCGGC TTCGGTAGTC
GCGCGTGGAC TGGTTGCTTT TGCGTTGGGT ACCGACACCG CCGGATCGGG GCGTGTTCCC
GCAGGTTTTA ACAATATCGT CGGTCTGAAG CCGACCAAAG GGTGGCTATC GGCAAGCGGC
GTTGTACCAG CTTGTCGTCT GAATGACACC ATCTCCGTGT TCGCGTTAAC GGTCGAAGAT
GCTTTTACCG TCGCGGAACT GGCTGGCGGA TACGATGCAA CAGATGCTTA CTCGCGCCGC
CATCCGGGGA GTGCGCCTGC CGCACTGCCA ACCGCACCGC GTTTTGCTAT CCCCAGCGAT
CCGACCTTTT TTGCCGATGC CACCGCACAG GCAGCCTGGC AGCACGCGCT GGCCGAAGTT
GAAGCGACGG GTGCGACGCT GCACCCTATC GATTTCAGTG TATTCACGCA GTTGGCAGAG
CAACTTTACC AAGGCTCTTG GGTGGCAGAG CGCACGGTGG CTGTTGGTGA CATGCTACGG
CAGCCAGAAA GTATGGATCC GGTGGTGCAC GGTATTGTGG CGAGCGGCGA GCGTTTCAGT
GCGGTAGAGG CTTTCAAAGC CGAATACCTA CGGGCTGAAC TGGCACGTCA AATCCAACAG
ACGCTGGCCG CGTTCGATGC GTTAGTTGTA CCGACCTCGC CGACCATCCA CACGCTTGAG
GCGATGAAGC AGGAACCGGT GCGCTACAAC TCTCAGTTGG GAACCTACAC CAACTTTACC
AATCTGGCCG ATCTCTCGGC GCTGGCGCTG CCTGCCCCTT TCCGTGCTGA CGGCTTGCCC
GCAGGTATCA CGCTGATTGC GCCCGCTTGG TATGACCGTG CATTAGCGAG TTTTGGTCTG
CGCTGGCAGG CACAACTGGC GCTCACGCTG GGCGCAACCG GAAAACCGCT GCCTGCCAGA
CCGGCCACAT TACTACCTTC CGCATTGCAC GTTCGTCTCG CCGTTGTCGG CGCACATCTA
ACGGGCATGC CGCTGAACCA TCAACTGATC AACCGGGATG CGGTATGGAT AGAAGAGACG
CATACGGCGG GAAACTATCG TCTTTATGCG TTGGCGAATA TGCAACCGGC TAAGCCCGGT
TTAGCGAAAA GCACCGATGG CGCGGCGATT GTCGTCGAAC TATGGGACAT CCCGCTGGCA
CGTTTTGGTG AGTTTGTCGC AGAGATTCCC GCGCCGTTGG GAATTGGCAC GCTGACGTTA
GCGGACGGGC GACAGGTTAA AGGCTTCATC TGTGAACCGG CTGCACTGAG CGACGCCGTG
GATATCACGG AGTTCGGTGG CTGGCGCAAC TGGCTTACCC GTCAGGAGGC GTCTCATGTT
TAA
|
|---|
| Protein sequence | MPRMTGLTLQ EWKQHYQQQA DSVGETLSSL LASLSADDPA WIVLATPELI EVQIAALLPR
YRENPDALSL FGVPFAVKDN IDVAGWPTSA ACPAFTYLAD KDATAVAKLK AAGAIVIGKT
NLDQFATGLV GTRSPFGAVP NTFNTDYISG GSSSGSASVV ARGLVAFALG TDTAGSGRVP
AGFNNIVGLK PTKGWLSASG VVPACRLNDT ISVFALTVED AFTVAELAGG YDATDAYSRR
HPGSAPAALP TAPRFAIPSD PTFFADATAQ AAWQHALAEV EATGATLHPI DFSVFTQLAE
QLYQGSWVAE RTVAVGDMLR QPESMDPVVH GIVASGERFS AVEAFKAEYL RAELARQIQQ
TLAAFDALVV PTSPTIHTLE AMKQEPVRYN SQLGTYTNFT NLADLSALAL PAPFRADGLP
AGITLIAPAW YDRALASFGL RWQAQLALTL GATGKPLPAR PATLLPSALH VRLAVVGAHL
TGMPLNHQLI NRDAVWIEET HTAGNYRLYA LANMQPAKPG LAKSTDGAAI VVELWDIPLA
RFGEFVAEIP APLGIGTLTL ADGRQVKGFI CEPAALSDAV DITEFGGWRN WLTRQEASHV
|
|---|
| |