| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2382 |
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| Symbol | |
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| ID | 8530783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2581295 |
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| End bp | 2584282 |
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| Gene Length | 2988 bp |
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| Protein Length | 995 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | virulence protein SrfB |
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| Protein accession | YP_003259758 |
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| Protein GI | 261821652 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGA CAATTACCGA TTATAAACAA CGCATTACGT TGATTCAGGA CAGCGGGATT
CAGTTTTTGG ATTTTGCGTT AAAGCCGCAG TTTTTGGCTG AACAGCCTAA CGGCTATGTT
CGCAAAAGTG CCAACGGCCC CTTACTGCAT CTGCTTTACG ATGAAAACAC GGACAAATTC
CTGCTGCCTT CTGCAACGGG TATGCAACCG GAAGTGGTGA AGCCTGAGTT GAGTATTTCA
CTTGAGCAAT CGCTGAAGCT GCTGGAGAAA GTCTGGTTGC CACTGCCCTT CTTCCGCTTC
AATCCGCCGC GTACTTTTAT GGGGGGCCCG GACAACTGGG CTCGCATGCA GATCCTGACG
TTGGATACGC CCGATCAAGA CGGCAACACG CACCGCATTT GTCTGGCGTT CGATACCAAA
ACCTATCCCG AAGGTCATGA ATACGAGTCG CTGGCACCGA ATGCCAATGA CATCAAAACG
GGTGGAAATT TCGCGCTGGC TTATCACAGC GATGAGTTGG GTGAATTCCT CGATGAAACC
TGGGTTGACG GCTGGCTGCG TGAAGTCTTT ACTCAACAGG CAAAAGCGCA GGAAAACCGT
GATAGCCATG ATGTGAAAGT GGCGTTAAGG GGATTCGAAT ATCAGGCACA TTATTTAAAT
GTGCTAGATA TGCTGGGTAA CCAGCTTGAG ATACCGGAAA TCCGTATCAA CACCAGCACG
TTGCAGGAGC CGGTGGTCAA CGTCGACCTG ATTTTGGATG TCGGAAATTC ACACACCTGC
GGCATTTTGG TTGAGGATCA TGCAGACGAA AGCAACGGCC TGAAGCAAAC CTATGAACTG
CAACTGCGCG ATCTGAGTGA GCCACATTAT CTGTATAACG AACTGTTTGA GAGTCGCGTT
GAATTTTCTC AGGCAAAGTT CGGCAAGGAA AACTTCTCCG TGGAAAGCGG TCGTGATGAC
GCTTTCATCT GGCCGTCGAT CACTCGCGTC GGGCGTGAAG CCAGCCACAT GGCGCTGCTG
CGTCAGGGAA CAGAAGGCTC AAGCGGGATT TCCAGCCCGC GTCGTTACCT GTGGGACGAA
GAAAGCTATG CACCAGGCTG GCGCTTCAGC CAGACCGATG CCCATTCACA AACCGAGCCG
CTAGCGACTG CCATGCCGCT GACCATCATG CTGAATGATG AAGGTCAACC CCTCTACAAC
CAACCGCTGG ATGAGCGTTT ACCGGTATTT TCACCGCACT ATAGCCGCAG CTCGATCATG
ACCTTCATGC TCTCCGAACT GCTGGCACAG GCGCTCATGC AGATGAATAG CGCCGCCCAG
CGATTGAAGA TGATCCACAG CAGCGCACCG CGCCAATTGC GCAATATCAT TCTGACGCTG
CCTTCCGCGA TGCCGAAGCC TGAACGCGAA ATTTTCCGCC GTAGGATGCA TGAAACCATT
GCGCTGGTCT GGAAAGCGAT GGACTGGCAC CCGATGGATG ACGATTTCAC CACGCCAGCC
GACAAACAAC AGAGCCGGGT TCCGGTTCCT GACGTGCAAA TCGAATGGGA CGAAGCGACA
TGCGGACAGA TGGTTTACCT GTATAACGAA GCGCAGGTGA ATTTTGGCGG TCGAGCAGAA
GATTTTTTCG CCAGCATGGC GCGACCAGAT AAAGAACTCG ACGAAGGTGA ACCCGTAGGA
AAAACGCTGC GCATTGCCTC AATCGACATC GGCGGCGGTA CCACCGACCT CGCCATTACG
CAATATCTGC TCGATGACGG TGTGGGCAAC AACGTCAAAA TCATTCCACG CCTGCTGTTC
CGCGAAGGCT TTAAGGTTGC GGGTGACGAT ATCCTGCTGG ATGTGATTCA GCTTTATATC
CTCCCTGCAC TGCAGGCCGC GCTGAAAACC GCAGGGCTGG CCAATCCGGA TGCGCTGATG
GCGAAACTGT TCGGCAATGA AGGCCGTATG GACGCGCAGC TTACGCTACG CCAACAGGTG
ACATTGCAAG TCTTTATCCC GATCGGGCGT GCGATTCTGG AAGCCTATGA GCGCTTTGAT
CCACTGGACA CCAGCGCCGA GATCGAATCG ACCTTCGGCG AATTGTTGGA TCAGGCACCG
ACGGACAAAG TGCTGGAATA CATCAATACG GAAGTGCAGC GCGAGTTGCC GGTTAGCGAT
AGCGTATTTG ATATTTTGCA GGTGCCGCTC ATCCTCAAAC TGAACAAGCT GCACGGCGAA
TTCCTGTCTA ACAAAATGAA TATCACGCAG AATCTGCGCC TGATGTCTGA AGTGGTATCG
CTGTATTCGT GCGATGTGCT GCTGCTCACT GGCCGCCCTT CGCGCTTCCC GGGGATTCAG
GCGCTGTTCC GCCACCTGCA ACCGCTGCCG ATTAACCGAA TGCTGTCGCT GGATGGGTAT
CACACCAATG ATTGGTATCC GTTTAACAAA CGCGGGCGTA TCGATAACCC GAAATCCACC
GCCGCCGTCG GCGCGATGCT GTGCCTGCTT GCACTCGATC TGCGTCTACC GGGTTTTTAC
TTTAAGGTCG GTGATTTTCA ACCATACTCT ACGGTGCGCT ACCTCGGTAT GATGGATAGC
AATAACGCAC TGACGCTGGA TAACGTGTAT TACAGCGATA TCGATCTGGA TGCCCCGGAT
TTCGTGCTTG ACCCAAAACA TAGCTTCCAG GTGCGCGGTT CACTCTGCCT CGGTTTCCGC
CAGTTAGACA ACGAGCGCTG GCCTGCATCC TCGCTCTATA TGCTATCAAT TGTCGATCAA
GATTTAGCCC GTAAGGTCGT CGGTGACAGT AAGCTGTACG TCCGGTTGGC CGTGACAAAA
AGCGACGATC AGGACAGCCC TGAGCGCTTT GAGATTGCCG ATGCGGTACT GGAAGATGGC
ACTCGCGTGC CGCCCCATCA TTTACGACTC AAATTGAACA CATTATCCGC TAACGGTTCA
GGAGCGACCC ATTATTGGAT CGATAGTGGG AGTGTATTTA AAAAATGA
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| Protein sequence | MLATITDYKQ RITLIQDSGI QFLDFALKPQ FLAEQPNGYV RKSANGPLLH LLYDENTDKF
LLPSATGMQP EVVKPELSIS LEQSLKLLEK VWLPLPFFRF NPPRTFMGGP DNWARMQILT
LDTPDQDGNT HRICLAFDTK TYPEGHEYES LAPNANDIKT GGNFALAYHS DELGEFLDET
WVDGWLREVF TQQAKAQENR DSHDVKVALR GFEYQAHYLN VLDMLGNQLE IPEIRINTST
LQEPVVNVDL ILDVGNSHTC GILVEDHADE SNGLKQTYEL QLRDLSEPHY LYNELFESRV
EFSQAKFGKE NFSVESGRDD AFIWPSITRV GREASHMALL RQGTEGSSGI SSPRRYLWDE
ESYAPGWRFS QTDAHSQTEP LATAMPLTIM LNDEGQPLYN QPLDERLPVF SPHYSRSSIM
TFMLSELLAQ ALMQMNSAAQ RLKMIHSSAP RQLRNIILTL PSAMPKPERE IFRRRMHETI
ALVWKAMDWH PMDDDFTTPA DKQQSRVPVP DVQIEWDEAT CGQMVYLYNE AQVNFGGRAE
DFFASMARPD KELDEGEPVG KTLRIASIDI GGGTTDLAIT QYLLDDGVGN NVKIIPRLLF
REGFKVAGDD ILLDVIQLYI LPALQAALKT AGLANPDALM AKLFGNEGRM DAQLTLRQQV
TLQVFIPIGR AILEAYERFD PLDTSAEIES TFGELLDQAP TDKVLEYINT EVQRELPVSD
SVFDILQVPL ILKLNKLHGE FLSNKMNITQ NLRLMSEVVS LYSCDVLLLT GRPSRFPGIQ
ALFRHLQPLP INRMLSLDGY HTNDWYPFNK RGRIDNPKST AAVGAMLCLL ALDLRLPGFY
FKVGDFQPYS TVRYLGMMDS NNALTLDNVY YSDIDLDAPD FVLDPKHSFQ VRGSLCLGFR
QLDNERWPAS SLYMLSIVDQ DLARKVVGDS KLYVRLAVTK SDDQDSPERF EIADAVLEDG
TRVPPHHLRL KLNTLSANGS GATHYWIDSG SVFKK
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