Gene Pecwa_2020 details

Gene Information

• Locus tag: Pecwa_2020
• ID: 8530419
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2199709
• End bp: 2200410
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 46%
• Product: response regulator receiver and unknown domain protein
• Protein accession: YP_003259406
• Protein GI: 261821300

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.105388
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCACA CTGAACATTT CGATGTCTTA ATCGTTGAAG ATGAAGGTAA GCTGGCAAAT 
ATTCATGCTG AATTTATTGA AAAACATTTC AATATGCATG TCGTTGGTAT TGCCGCTACG 
CTTTTTGAAG CCAAAAAACT CCTTCAGCAA CACAAACCAC GTTTGATCCT GCTTGATAAC 
TATTTGCCCG ATGGCGAGGG AGTTTCGCTG ATTGAAAGCC AATTACTCAA AGGAATGGAC 
TGTTCCGTCA TTTTTATTAC CGCCGCCAGC GATATGAATA CATGTGCCCA GGCGATTCGC 
TGCGGTGCCT TTGACTACAT CATCAAACCA CTCTCTTACC CGCGACTGCG TTCTTCGCTG 
GAGCGCTTTA TTCAATTTGT CAAAACCCAG CACACATACA AAGTTGTCGA TCAGCAGAAT 
GTCGATATCC TTTATCAGTT GCAATCATCT GGTGCTGCCC CCTCCGCCTC CACAAAAGGT 
ATTGAGGAGA ACACGCTGGG ATTGATCAAA CAGATTTTTG CCACTGATGG AGGCGAGACG 
TTTTATTCCG TCGACGATAT CGTCGAAAAG ACAGGGCTCA GTAAAACCAC CGCGCGCCGC 
TATCTCGAAT TCTGCGTCGA GAACCAATTC CTCGATATCG AAATGCGTTA CGGAAAAATC 
GGTCACCCGC GTCGGTTGTA TCGTACAAAG AGCGCCAATT AG 

 

Protein sequence

MQHTEHFDVL IVEDEGKLAN IHAEFIEKHF NMHVVGIAAT LFEAKKLLQQ HKPRLILLDN 
YLPDGEGVSL IESQLLKGMD CSVIFITAAS DMNTCAQAIR CGAFDYIIKP LSYPRLRSSL 
ERFIQFVKTQ HTYKVVDQQN VDILYQLQSS GAAPSASTKG IEENTLGLIK QIFATDGGET 
FYSVDDIVEK TGLSKTTARR YLEFCVENQF LDIEMRYGKI GHPRRLYRTK SAN