Gene Pecwa_1518 details

Gene Information

• Locus tag: Pecwa_1518
• ID: 8529908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1648934
• End bp: 1651117
• Gene Length: 2184 bp
• Protein Length: 727 aa
• Translation table: 11
• GC content: 52%
• Product: TonB-dependent receptor plug
• Protein accession: YP_003258922
• Protein GI: 261820816

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA AGGCCACACG CTGGGCACTC TTTATGCTGC CTGCTATTTA TAGCGGTGCA 
ATTAATGCAG CCACAAACGA TTTATCCATA ACACATTCAT CCACCAGCCA TTCAACGACA 
AACAGTGATG AAATAACCGT TATTAGCGCA GGGAGAACGG AACAGAATTT ATGGGAAAGT 
CCCGTCACTA TGCAGGTTGT CGATAATGAA AAGCTGAGTA AATATACCAG CGATTCTATT 
GCCGAAGCGC TACGTGATAT TCCCGGCGTC GATATTACTG ATACCGCATT GGCGGGTCGT 
AAACAAATAC GTATTCGCGG GGAAGAAGCC TCACGCGTAT TAGTGTTAAT TGACGGACAG 
GAAGTCACTT ATCAACGTGC GGGGCCCAAT TACAGCCTCG GATTATTAAT TGATCCTTCT 
TATATCGAGC GCATCGAAGT GGTGAAAGGC CCGCATTCGG TATTATATGG TTCACAGGCT 
ATCGGCGGCG TCATTAACTT TATTACCCGC AAAGGCGGAG ACAAGCCGCT GAGTGGCAAA 
ATCAAAGCCG TTTACGACAG CGCTACCGCA GGCTGGCAGG AATCCGGCTT AGCCTACGGG 
TCCATCGGCA ACTTTGACTA CCGCCTCAGC GGCAGCTATA GCGACCAAGG CAACCGCAGC 
ACGCCGGATG GCCGTCTGCC GGATACCCAT TTTCGTAACA GCGGCCAGTC AGCTTGGCTC 
GGCTATCGCC TGGGCGATCA TAAGTTCGGC CTGTCGCTGG ACAGCTTCAA ACTCAGTACG 
CAGACTTATA CCGATTCGGA TGAATACGAC AGTTTTAGCG TGCGAATTCC TGAATTGGAA 
AGAAAGAAGG TCGGCCTATT TTATGACTGG CAGCTCGGCG GCGAAGTGCT GAAAAATCTG 
CATCTGGACG CCTACCAGCA AAATATTAAG CGTGAGTTCC GTAACGATTT ATCGCAGAGC 
GGTAACCCGC TGCGTTATAA CGGCATGTCG CTTTATCAGG GCAAAATGGC GATGAGTACA 
GGAACCGACG ACAAGCAGAC CAGTCGAGGG TTGACCTTAC AGGCGGATAT CACGCCATTA 
GCCGATCATA CGCTGATTGC AGGGGGACAG TGGCTCTCCG ATGTGGTGAA GCAAAACGCC 
TTCTCCGATG TTCATGCAGA CGGTTTTCTC TCTCCTGTCG CACCTTTCCC TATCTCGGTT 
AACCCCAGTT CGGTATCCAA CAGCCACTGG CGGCAAAATA GCTGGGCACT GTTCGCACAG 
GATGCATGGA AAATAACGCC AGACTGGACG TGGACGCTAG GCGCGCGCCA GTATTGGGTT 
GAGTCACTCT CATACGGCGG ACAAAAGACA GGCACAATAA GAATGAACGG TATGGTGATG 
CCGAACAACA GCACGTTCGC CACGAAAAAG GAAAATGACA GTACCTTAGT CACCGCCAGC 
AGTTTGCGCT ATTCCGGCTT TGACAATATC CAACTGCGCG CCTCCTTTGC CCAAGGTTAT 
GTCTACCCTA CCCTGACGCA TAAATTTTAC GACACGGCGG CGGGCGGGAA TACCACTTAT 
GGTAACGCCG GTCTACAAGC GGAAACGTCG GATAATTATG AGATCGGCAT GCGCTATAAA 
GATGAGAACT GGCTGCTGGA TAGCGCCGTT TATCATTCAC GCGCTAAAGA TTACATCACC 
ACGCTTAACT GCGCGGGTAA CGCCATCTGT TCCGGCAGTA CGGCTGAAGG TAGCCGTTAC 
TACGCTAATG CCAATCGTGC GACCACATAC GGGATGGAAA TGTATGCGGA ATACCTCGGC 
TGGACGCTGT CTCCTTACGT TAACGGTAAC ATCATCCGCC GTGAGCTGGA ACTGCCGACT 
CGCAGCACCT ATCGCACCGG TGAACCCACC TTTACTGGCA AGATCGGGGT CAAAAACATC 
ACGTTGTTCG AGCGAATGGA GCTGGAATCA GATCTCTACT TCCGGGCAGC CTCACGAGCG 
AAGGATGAAA CAGCAGATAC CGCCGTCCAG CATAGCGGTT GGGCAACGGC CAATCTGGAA 
TTCACCAGTA CCTTCGGCAG CGAGAATCAG TATCAAGTCA CGCTGGCATT GAACAACCTG 
CTGGATAAAC GTTACACCAC CGCGCACGAA AGCATTCCGG CATCCGGTTT CAGCACCGCG 
ATTGGCGCGG CGTTCTCATT CTGA 

 

Protein sequence

MNKKATRWAL FMLPAIYSGA INAATNDLSI THSSTSHSTT NSDEITVISA GRTEQNLWES 
PVTMQVVDNE KLSKYTSDSI AEALRDIPGV DITDTALAGR KQIRIRGEEA SRVLVLIDGQ 
EVTYQRAGPN YSLGLLIDPS YIERIEVVKG PHSVLYGSQA IGGVINFITR KGGDKPLSGK 
IKAVYDSATA GWQESGLAYG SIGNFDYRLS GSYSDQGNRS TPDGRLPDTH FRNSGQSAWL 
GYRLGDHKFG LSLDSFKLST QTYTDSDEYD SFSVRIPELE RKKVGLFYDW QLGGEVLKNL 
HLDAYQQNIK REFRNDLSQS GNPLRYNGMS LYQGKMAMST GTDDKQTSRG LTLQADITPL 
ADHTLIAGGQ WLSDVVKQNA FSDVHADGFL SPVAPFPISV NPSSVSNSHW RQNSWALFAQ 
DAWKITPDWT WTLGARQYWV ESLSYGGQKT GTIRMNGMVM PNNSTFATKK ENDSTLVTAS 
SLRYSGFDNI QLRASFAQGY VYPTLTHKFY DTAAGGNTTY GNAGLQAETS DNYEIGMRYK 
DENWLLDSAV YHSRAKDYIT TLNCAGNAIC SGSTAEGSRY YANANRATTY GMEMYAEYLG 
WTLSPYVNGN IIRRELELPT RSTYRTGEPT FTGKIGVKNI TLFERMELES DLYFRAASRA 
KDETADTAVQ HSGWATANLE FTSTFGSENQ YQVTLALNNL LDKRYTTAHE SIPASGFSTA 
IGAAFSF