Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1215 |
Symbol | |
ID | 8529604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1316138 |
End bp | 1323766 |
Gene Length | 7629 bp |
Protein Length | 2542 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | type 1 secretion target domain protein |
Protein accession | YP_003258636 |
Protein GI | 261820530 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGGTG TGATTGGTGT TATTAAATTC GTTATTGGGC AAGTTTTTAT CGTTGCGCTT GATGGGAGCC AGAGGCTGCT CGTTGCTGGC GATCGGGTTT ACAGCGGTGA AGAAGTGGTG ACCGGTGCTA ACGGCGCGGT TTCGATCACA TTACCTGATG GCAAGACACT GGATCTGGGG CGTGATAGCC GCTGGAGCGA TGTAAGTAGT GCGTCCTCTC AGACAAATGC GGATACCGCT AATGATATCG CAGCTATACA AGATGCCATC GCTCAGGGCG CTGACCCAAC GCAAGTGCTA GAGGCCGCTG CTGCGGGTAA TGATAACACA GGCGAAGCGG GTGACGGCGG TGGGAATCAC ACTGCGGTCG TACTGGATTT GACCGGACAA ATAGTGGATC CAATAATCGG CTACCCAACC GAAGGGATCA ATTTCGCAAT AAATAATGTC AATCAGACAG ACGGTTTTAA TACTCAAGCA TTATTGGTTA CGCCATCCTC TCTGGAAAAT AACGACACTA TTACATTGAG TTCGGACGGA CGGGTTGTTG AGGGCGGAAA AATTATCGTT ACGGCAACGG TAAATAACCC AGTCACTGGT AGCGATCTTG TCATAACGTT AACAAATGGG TCAACGATTA CGATTCCAGT TGGGGAAACG GGCACGTCCG TGACGATAGA TACGCGTGGT GATGATGCTT ATCGTCAAGG GGATGAATTT GTCAATATTG GTATCGATTC TACCTCAGGC GGAAGTTATA CCAGCCTAGA TACCACTAGT ACGACGACGA CGGTCGTTGG GGATAACAAT GACTCGACCA CCATCACCCT GAGTTCGGCC AATGAGGTGA CGGAAGGGGG GATTATCACG GTGACGGCCA GGGTGGACAA CCCTGTGACG GGGAGTCCGT TGGTGATTGA CATGGGGAAT AACGTCAGCA TTACCATTCC GGTTGGTCAG AGCAGCGGCA CCGTTGATGT GGCTACGCGC CCGGACGATG CCTATCAGCA GGGCAATGTA CCAGTCGAGT TCTCGATTGT GGGCACCTCT GGAGGCAACT ACGAAGCGCT GGATACGACC AGCACCACCC GCACCACCGT TGTGGACAAC AATGACGGGA CCAAGATTAC ATTGGAAGGC CCTGATACAG TTACTGAAGG TGAAGAGATC ACGATTATTG CCAGGGTCGA ATTACCGCCT CAAGGTAGCG ATCTGGTCAT TCGGTTGACT AATGGGGAAA TTGTCACGAT TCCTGTTGGT AAGACCGAAG GCTCTGTTAC CTATGCTGCA CGCGGCGATG ACAATCTGGT ACAGGGGGAT ATTCCGCAAA CCGTAGGGAT TGAAACAGCA ACCGGCGGCA ATTACGAAAA TCTTGTCAAT GGCGATCCTA TTGTTACTAC GGTGCAAGAC AACGATGTAC CGGTGCTGAC GGTGGGGGAT GCGGGAACCG TGGCGGAAGG CCAGCCGGCG CGCTTTGAGA TTGCGCTGAG CAAGCCGGTG GATGCGGCGA CCACGCTGAC CTTCACGGTA CGCCACGGCA GTACCGACGC GGACGACATC GGCACGCCGA CGGTCACGAT AGCCGGGCAG CCGGTGGCGG TGACGGTGAA CGCGGACGGC AGTTACAGCG TACCGGTGGC GGCCGGTACT ACCGACGGCA TTGTGGTGTC GGTGCCGACC GTGGACGATG GGGTATTTGA AGGCAACGAG ACCTTTGAAC TGGTGGGCAC GCTGACCGGC ACCACGGCGT CGGGCACCCC GCTGCCGGCC GGGATCGGTG ATACCGGGCA GGCGACCATC AGCGATTTGA ATAGCACCGA TCCGCAAACC CCGAACCCGG GCGCGGATGT GCCGGTGCTG ACGGTGGGGG ATGCGGGAAC CGTGGCGGAA GGCCAGCCGG CGCGCTTTGA GATTGCGCTG AGCAAGCCGG TGGATGCGGC GACCACGCTG ACCTTCACGG TACGCCACGG CTCTACCGAC GCGGACGACA TCGGCACGCC GACGGTCACG ATAGCCGGGC AGCCGGTGGC GGTGACGGTC AACGCGGACG GCAGTTACAG CGTACCGGTG GCGGCCGGTA CTACCGACGG CATTGTGGTG TCGGTGCCGA CCGTGGACGA TGGGGTATTT GAAGGCAACG AGACCTTTGA ACTGGTGGGC ACGCTGACCG GGACCACGGC ATCGGGCACC CCGCTGCCGG CCGGGATCGG TGATACCGGG CAGGCGACGA TCAGCGATTT GAACCGTGGC ACGCCGGACA ACCCGAGTGC CGGCGCGGAT GTACCGGTGC TGACGGTCGG GGATGCGGGA ACCGTGGCGG AAGGCCAGCC GGCGCGCTTT GAAGTTGCGC TGAGCAAGCC GGTGGATGCG GCGACCACGC TGACCTTCAC GGTACGCCAC GGCTCTACCG ACGCGGACGA TATCGGCACG CCGACGGTCA CGATAGCCGG GCAGCCGGTG GCGGTGACGG TGAACGCGGA CGGCAGTTAC AGCGTACCGG TGGCGGCCGG CACCACCGAC GGGATTGTGG TGTCGGTGCC GACCGTGGAC GATGGGGTAT TTGAAGGCAA CGAGACCTTT GAACTGGTGG GCACGCTGAC CGGCGCCACG GCGTCGGGCA CCCCGCTGCC GGCCGGGATC GGCGACACCG GGCAGGCGAC CATCAGCGAT TTGAATAGCA CCGATCCGCA AACCCCGAAC CCGGGCGCGG ATGTGCCGGT GCTGACGGTC GGGGATGCGG GAACGGTGGC AGAAGGCCAG CCGGCGCGCT TTGAGATTGC GCTGAGCAAG CCGGTGGATG CGGCGACCAC GCTGACCTTC ACGGTGCGCC ACGGCTCTAC CGACGCGGAC GATATCGGCA CGCCGACGGT CACGATAGCC GGGCAGCCGG TGGCGGTGAC GGTGAACGCG GACGGCAGTT ACAGCGTACC GGTGGCGGCC GGCACTACCG ACGGCATTGT GGTGTCGGTG CCGACCGTGG ACGATGGGGT ATTTGAAGGC AACGAGACCT TTGAACTGGT GGGCACGCTG ACCGGGACCA CGGCATCGGG CACCCCGCTG CCGGCCGGGA TCGGTGATAC CGGGCAGGCG ACCATCAGCG ATTTGAATAG CACCGATCCG CAAACCCCGA ACCCGGGCGC GGACGTACCG GTGCTGACGG TCGGGGATGC AGGAACGGTG GCGGAAGGCC AGCCGGCGCG CTTTGAAGTT GCGCTGAGCA AGCCGGTGGA TGCGGCGACC ACGCTGACCT TCACGGTGCG CCACGGCTCT ACCGACGCGA ACGATATCGG CACGCCGACG GTCACGATAG CCGGGCAGCC GGTGGCGGTG ACGGTGAACG CGGACGGCAG TTACAGCGTA CCGGTGGCGG CCGGCACCAC CGACGGGATT GTGGTGTCGG TGCCGACCGT GGACGATGGG GTATTTGAAG GCAACGAGAC CTTTGAACTG GTGGGCACGC TGACCGGGGC CACGGCATCG GGCACGCCGC TGCCGGCCGG GATCGGCGAC ACCGGGCAGG CGACCATCAG CGATTTGAAT AGCACCGATC CGCAAACCCC GAACCCGGGC GCGGACGTAC CGGTGCTGAC GGTGGGGGAT GCAGGAACCG TGGCGGAAGG CCAGCCGGCG CGCTTTGAGA TTGCGCTGAG CAAGCCGGTG GATGCGGCGA CCACGCTGAC CTTCACGGTG CGCCATGGCT CTACCGACGC GGACGACATC GGCACGCCGA CGGTCACGAT AGCCGGGCAG CCGGTGGCGG TGGCGGTGAA CGCGGACGGC AGTTACAGCG TACCGGTGGC GGCCGGCACT ACCGACGGCA TTGTGGTGTC GGTGCCGACC GTGGACGATG GGGTATTTGA AGGCAACGAG ACCTTTGAAC TGGTGGGCAC GCTGACCGGG ACCACGGCAT CGGGCACCCC GCTGCCGGCC GGGATCGGTG ATACCGGGCA GGCGACCATC AGCGATTTGA ATAGCACCGA TCCGCAAACC CCGAACCCGG GCGCGGACGT ACCGGTGCTG ACGGTCGGGG ATGCAGGAAC GGTGGCAGAA GGCCAGCCGG CGCGCTTTGA GATTGCGCTG AGCAAGCCGG TGGATGCGGC GACCACGCTG ACCTTCACGC TGCGCCACGG CTCTACCGAC GCGAACGATA TCGGCACGCC GACGGTCACG ATAGCCGGGC AGCCGGTGGC GGTGACGGTG AACGCGGACG GCAGTTACAG CGTACCGGTG GCGGCCGGTA CTACCGACGG CATTGTGGTG TCGGTGCCGA CCGTGGACGA TGGGGTATTT GAAGGCAACG AAACGTTTGA ACTGGTGGGC ACGCTGACCG GGACCACGGC ATCGGGCACC CCGCTGCCGG CCGGGATCGG CGACACCGGG CAGGCGACCA TCAGCGATTT GAATAGCACC GATCCGCAAA CCCCGAACCC GGGCGCGGAC GTACCGGTGC TGACGGTCGG GGATGCGGGA ACCGTGGCGG AAGGCCAGCC GGCGCGCTTT GAAGTTGCGC TGAGCAAGCC GGTGGATGCG GCGACCACGC TGACCTTCAC GCTGCGCCAC GGCTCTACCG ACGCGGACGA TATCGGCACG CCGACGGTCA CGATAGCCGG GCAGCCGGTG GCGGTGACGG CGAACGCGGA CGGCAGTTAC AGCGTGCCGG TGGCGGCCGG CACCACCGAC GAGATCGTGG TGTCGGTGCC GACCGTGGAC GATGGGGTAT TTGAAGGCAA CGAGATCTTT GAACTGGTGG GCACGCTGAC CGGCGCCACG GCGTCGGGCA CCCCGCTGCC TGCCGGGATC GGTGATACCG GGCAGGCGAC CATCAGCGAT TTGAACCGTG GCACGCCGGA CAACCCGAGC GCCGGCGCGG ATGTACCGGT GCTGACGGTC GGGGATGCGG GAACGGTGGC AGAAGGCCAG CCGGCGCGCT TTGAAATTGC GCTGAGCAAG CCGGTGGATG CGGCGACCAC GCTGACCTTC ACGGTGCGCC ACGGCAGTAC CGACGCGAAC GACATCGGCA CGCCGACGGT CACGATAGCC GGGCAGCCGG TGGCGGTGAC GGTGAACGCG GACGGCAGTT ACAGCGTACC GGTCGCGGCC GGCACCACTG ATGGGATCGT GGTGTCGGTG CCGACCGTGG ACGATGGGGT ATTTGAAGGC AACGAGACCT TTGAACTGGT GGGCACGCTG ACCGGCACCA CGGCGTCGGG CACGCCGCTG CCGGCCGGGA TCGGCGACAC CGGGCAGGCG ACCATCAGCG ATTTGAATAG CACCGATCCG CAAACCCCGA ACCCGGGCGC GGATGTACCG GTGCTGACGG TGGGGGATGC GGGAACGGTG GCAGAAGGCC AGCCGGCGCG CTTTGAGATT GCGCTGAGCA AGCCGGTGGA TGCGGCGACC ACGCTGACCT TCACGGTGCG CCACGGCAGT ACCGACGCGG ACGATATCGG CACGCCGACG GTCACGATAG CCGGGCAGCC GGTGGCGGTG ACGGCGAACG CGGACGGCAG TTACAGCGTA CCGGTGGCGG CCGGTACTAC CGACGGCATT GTGGTGTCGG TGCCGACCGT GGACGATGGG GTATTTGAAG GCAACGAAAC CTTTGAACTG GTGGGCACGC TGACCGGCAC CACGGCGTCG GGCACCCCGC TGCCGGCCGG GATCGGTGAT ACCGGGCAGG CGACCATCAG CGATTTGAAT CATGCACCGG TCACCGCCGA CCAGTCGATC CGTACCGAGG AAGATACGTC GGTCAGTGGC ACTATTACGG CAAGCGATAT GGACGGTGAC ACGCTGAGTT ACGGGGTGGG TACGCCGCCG CAGAACGGCA CGCTGGCGCT GGACAGCACC ACTGGGAAAT ACACGTACAC GCCGGCTGCC AACTTTAGCG GCAGCGACCA CTTTACGGTC ACGGTGGCGG ACGGCAACGG CGGCACGGCA ACCAGCACGG TGACGGTGGG CATTACCCCA GTAGCCGATG CGCCAGTCGT GAGCCTGAGC TCTACCGTCG GTGCTACGAC GCCGGGTTCT GCGGAAATCA TCAAGGTGAA CGGAGGAAGT GGGAAGTCCG GTGGGTTTGA TGTACAAGAT GGAAAAATTG TTAAGATCGG CAGTGGCGTG CGCGTTTGGT TGACAGAGGG CGACACTGCG CCTACTGCTG CTAACTCTTC TGAACAGATT AAGTATTACG GCAAAGATAA TGGCAATGGT AATCCTGGGG GATCGACAAG CTATGCTGAC ATTTTTGTTG TTCATTCCAA AAGCGGTTAT TTCTACCGCC AGTCTGATTG GACTGAAGCA CAGAAACAGT ATAACCAGCT TGATTCTGTC CACGGGAATA GTCAGTCACA GTCGAGTAAC CCAGGTAAAG ATTATATCTT TGTCCAAAAA GAAGAGGGCT TTACCTATAA GGCTGAAAAT TCGACGAATA ATAGAAATAA TAACTTCAAC ACAATGGATG GCGTGAAAGT TACTTATTCT GACGGGAAGG GGCATTCGGG GGCTTTAATT AAGCAGGTAA GCAACCAGCT TGAAGGTGTG ATCTACAGCG ATGGATCGAC ATATACCGCC GGAAATAGCG CGACAGTGGA CAAAGTACCC GGTCAGGCGG GAAAACAGAT CTATACGCTC GATGTTTCAG CGGCATTGAC CGATCGTGAC GGTAGTGAAA TGTTGTCAGG GATTCGGCTG ACGGGGATCC CGACGGGTAC GGTGCTGACT GACCAGATCA ACAACGTGAA GTATACCGTG GGTGATGATG GTACATACCT GATTCAAAAT GCGCACAATG CCCAAACTCT GGCTGGGAAG ATTACGCTTG AGGTGCCAGG TGATGGCGGT AAATTGAATG TCATCGCGCA GGCGACATCG ACAGAAATTA GCAACCACGA TACGGCAACG GGCTATTCGG CGGAAGGCGC TGAGCAGTAT GGATTGAGTG TCGGTACGGC AGGTAACGAT ACGATGTCCG GCACGTATAA TGATGATGTT CTGTTCGGCG ATGTCGTATC GTTCCCGAAT ATCGATGGCA ATGGTATCAC TGCTTTGCAG AACTACATTG GTAAGCAGTT AGGTATGCAA ACGGGTGTGC CGACCACGAA GGACATGCAT AACTATATTG CGTCGCATAG CTCGGAGTTT GATCTGTCGC CAGCCAAAGG AGGGAATGAC ATACTCAATG GCGGTGACGG GGATGACATC CTTTTCGGTC AGGGCGGCAA TGATACCCTC TACGGTGGTG CAGGGAATGA CTTGCTCTAC GGCGGTAGCG GAGACGACAT CCTGATTGGC GGCGCAGGGG GGGATACGCT TATCGGTGGT GCGGGTGCGG ATACCTTTAA ATGGCAGGCT GGTGATATTG GCAACGATGT GATCAAAGAC TTTAATGCCA AAGAGGGTGA CCGGATAGAT CTAAGTGATT TGATTGGTGA GTTAGAGCAA GGAACCGATA TCAGTCGCTA TATTCGCATC ACAGATAGCC AGGGTTCTCC GGTGATTGAA GTGAGCACGG CAGGGAACTT TACGGCAGAT AAAGGCGGAA CGGTTGCGGT GTCGATTACG TTGGAACATT ATAACGGTGC ATTACCGTCG CTTGAAAGTC TGGTGAGTAA ACCTGAACAG CCCCATTGA
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Protein sequence | MNGVIGVIKF VIGQVFIVAL DGSQRLLVAG DRVYSGEEVV TGANGAVSIT LPDGKTLDLG RDSRWSDVSS ASSQTNADTA NDIAAIQDAI AQGADPTQVL EAAAAGNDNT GEAGDGGGNH TAVVLDLTGQ IVDPIIGYPT EGINFAINNV NQTDGFNTQA LLVTPSSLEN NDTITLSSDG RVVEGGKIIV TATVNNPVTG SDLVITLTNG STITIPVGET GTSVTIDTRG DDAYRQGDEF VNIGIDSTSG GSYTSLDTTS TTTTVVGDNN DSTTITLSSA NEVTEGGIIT VTARVDNPVT GSPLVIDMGN NVSITIPVGQ SSGTVDVATR PDDAYQQGNV PVEFSIVGTS GGNYEALDTT STTRTTVVDN NDGTKITLEG PDTVTEGEEI TIIARVELPP QGSDLVIRLT NGEIVTIPVG KTEGSVTYAA RGDDNLVQGD IPQTVGIETA TGGNYENLVN GDPIVTTVQD NDVPVLTVGD AGTVAEGQPA RFEIALSKPV DAATTLTFTV RHGSTDADDI GTPTVTIAGQ PVAVTVNADG SYSVPVAAGT TDGIVVSVPT VDDGVFEGNE TFELVGTLTG TTASGTPLPA GIGDTGQATI SDLNSTDPQT PNPGADVPVL TVGDAGTVAE GQPARFEIAL SKPVDAATTL TFTVRHGSTD ADDIGTPTVT IAGQPVAVTV NADGSYSVPV AAGTTDGIVV SVPTVDDGVF EGNETFELVG TLTGTTASGT PLPAGIGDTG QATISDLNRG TPDNPSAGAD VPVLTVGDAG TVAEGQPARF EVALSKPVDA ATTLTFTVRH GSTDADDIGT PTVTIAGQPV AVTVNADGSY SVPVAAGTTD GIVVSVPTVD DGVFEGNETF ELVGTLTGAT ASGTPLPAGI GDTGQATISD LNSTDPQTPN PGADVPVLTV GDAGTVAEGQ PARFEIALSK PVDAATTLTF TVRHGSTDAD DIGTPTVTIA GQPVAVTVNA DGSYSVPVAA GTTDGIVVSV PTVDDGVFEG NETFELVGTL TGTTASGTPL PAGIGDTGQA TISDLNSTDP QTPNPGADVP VLTVGDAGTV AEGQPARFEV ALSKPVDAAT TLTFTVRHGS TDANDIGTPT VTIAGQPVAV TVNADGSYSV PVAAGTTDGI VVSVPTVDDG VFEGNETFEL VGTLTGATAS GTPLPAGIGD TGQATISDLN STDPQTPNPG ADVPVLTVGD AGTVAEGQPA RFEIALSKPV DAATTLTFTV RHGSTDADDI GTPTVTIAGQ PVAVAVNADG SYSVPVAAGT TDGIVVSVPT VDDGVFEGNE TFELVGTLTG TTASGTPLPA GIGDTGQATI SDLNSTDPQT PNPGADVPVL TVGDAGTVAE GQPARFEIAL SKPVDAATTL TFTLRHGSTD ANDIGTPTVT IAGQPVAVTV NADGSYSVPV AAGTTDGIVV SVPTVDDGVF EGNETFELVG TLTGTTASGT PLPAGIGDTG QATISDLNST DPQTPNPGAD VPVLTVGDAG TVAEGQPARF EVALSKPVDA ATTLTFTLRH GSTDADDIGT PTVTIAGQPV AVTANADGSY SVPVAAGTTD EIVVSVPTVD DGVFEGNEIF ELVGTLTGAT ASGTPLPAGI GDTGQATISD LNRGTPDNPS AGADVPVLTV GDAGTVAEGQ PARFEIALSK PVDAATTLTF TVRHGSTDAN DIGTPTVTIA GQPVAVTVNA DGSYSVPVAA GTTDGIVVSV PTVDDGVFEG NETFELVGTL TGTTASGTPL PAGIGDTGQA TISDLNSTDP QTPNPGADVP VLTVGDAGTV AEGQPARFEI ALSKPVDAAT TLTFTVRHGS TDADDIGTPT VTIAGQPVAV TANADGSYSV PVAAGTTDGI VVSVPTVDDG VFEGNETFEL VGTLTGTTAS GTPLPAGIGD TGQATISDLN HAPVTADQSI RTEEDTSVSG TITASDMDGD TLSYGVGTPP QNGTLALDST TGKYTYTPAA NFSGSDHFTV TVADGNGGTA TSTVTVGITP VADAPVVSLS STVGATTPGS AEIIKVNGGS GKSGGFDVQD GKIVKIGSGV RVWLTEGDTA PTAANSSEQI KYYGKDNGNG NPGGSTSYAD IFVVHSKSGY FYRQSDWTEA QKQYNQLDSV HGNSQSQSSN PGKDYIFVQK EEGFTYKAEN STNNRNNNFN TMDGVKVTYS DGKGHSGALI KQVSNQLEGV IYSDGSTYTA GNSATVDKVP GQAGKQIYTL DVSAALTDRD GSEMLSGIRL TGIPTGTVLT DQINNVKYTV GDDGTYLIQN AHNAQTLAGK ITLEVPGDGG KLNVIAQATS TEISNHDTAT GYSAEGAEQY GLSVGTAGND TMSGTYNDDV LFGDVVSFPN IDGNGITALQ NYIGKQLGMQ TGVPTTKDMH NYIASHSSEF DLSPAKGGND ILNGGDGDDI LFGQGGNDTL YGGAGNDLLY GGSGDDILIG GAGGDTLIGG AGADTFKWQA GDIGNDVIKD FNAKEGDRID LSDLIGELEQ GTDISRYIRI TDSQGSPVIE VSTAGNFTAD KGGTVAVSIT LEHYNGALPS LESLVSKPEQ PH
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