| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1041 |
|---|
| Symbol | |
|---|
| ID | 8529415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1126793 |
|---|
| End bp | 1128154 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003258465 |
|---|
| Protein GI | 261820359 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACA CGTTGTTAGC ATTGCTGGTT GCCGGATTTC TGCCGTTCAG CGCTCAAGCT
GAAGGAGAAA GCGTAACGCG CTATATCGTT ACCTTCCCGG CTGGCGATCA TGTTCCGTAT
CAGGGAGAAT TCGCCAAAAA CTTCCCCAAT GGTCTGCCGG TTGGTATTGG CTCTGGCCTC
TATTTCACGG GCAAACAGGG TGATGACCTG ATGTTCACCA CCGTCACCGA TCGCGGCCCA
AATGCCGATG CACCGCTATC TGACGGAAAA GAGGCCAAGA TCTTCGCTAG CCCTGACTTT
GCACCGCTAA TTATGGATAT TCGAGTTAGC GCGAAAGCAG CCGAAGCCAT TAATCCTCGA
TCGCTGCACG ATGCCGAGGG CAATATCACT GGCCTGCCCC TGCCTACGGA TTTTATCGGC
ACGACCAACG AAGTAGCGCT GAACGACGCG CTACAACCGC TCAGCACCAG CCAACGTGGA
CTGGACACCG AAGGGATCAC GCCGGATGGC AAAGGCGGTT TCTGGCTGTG TGACGAATAC
GGCCCTTTCC TGATCCATAT TGATGCCGGC GGGAAAATCC TGCAAAAATT CGGGCCGACG
CCTACGGGTA ATGAACACTC CGTTGCCAGC GGATTACCAA ATATCATCAA ATGGCGTCAG
CCGAATCGCG GTTTTGAAGG CCTGACTCGC CTGCCCGACG GCACGATCGT CATGGCCGTA
CAAAGTACGT TGGATATCGA CGGTAAAACC AAAAACAAAG CACAGTTTAC GCGTCTGGTG
ATGTTTAACC CGGAAACGCA AACCAGTCGT ATGCTGGGTT ATCCCATCAA CATCGACAGC
TATAAGAAAG CGAAAGATGC CAAGATCGGC GACATCATCG CACTGGATAA TCAGCGCATT
CTGCTGGTTG AGCAAGGCAT GGATAAAGAT AAACAGATGC AGAACCGCAT CTATCTGGTC
GATCTCAGTA AGGCGAGCGA CCTGACGCCG TTCGATGCCG AGGGTAAATC GCCAGAATTT
GACGATCCCG CTCAGTTGGA AAAACGTGGC ATTACGCTGG CGCACAAGCA GGAGTTGGTT
AACCTGCGTA AGCTTGGCTG GCAGCAAGAG AAAGTGGAAG GTCTTGCGCT AGTCGATAAA
CAAACGCTGG CCGTCATCAA TGATAACGAT TTTGGCCTGC AATCCGTGCT GCACTCTCCC
GCGAAGGCAA AAGATAAGGC GGATGACTAT CAGGCGACAG CCGACGGCAA ACTCACGCGA
GATGGCAAGG CGGTCGAGAC GACGTTAGAA ATCAAACCAT TGCAGAAGCC AGAAGCCGAC
AACGAACTGT GGTTGATTAC ATTGGCACAG CCGCTGAAAT AA
|
|---|
| Protein sequence | MKHTLLALLV AGFLPFSAQA EGESVTRYIV TFPAGDHVPY QGEFAKNFPN GLPVGIGSGL
YFTGKQGDDL MFTTVTDRGP NADAPLSDGK EAKIFASPDF APLIMDIRVS AKAAEAINPR
SLHDAEGNIT GLPLPTDFIG TTNEVALNDA LQPLSTSQRG LDTEGITPDG KGGFWLCDEY
GPFLIHIDAG GKILQKFGPT PTGNEHSVAS GLPNIIKWRQ PNRGFEGLTR LPDGTIVMAV
QSTLDIDGKT KNKAQFTRLV MFNPETQTSR MLGYPINIDS YKKAKDAKIG DIIALDNQRI
LLVEQGMDKD KQMQNRIYLV DLSKASDLTP FDAEGKSPEF DDPAQLEKRG ITLAHKQELV
NLRKLGWQQE KVEGLALVDK QTLAVINDND FGLQSVLHSP AKAKDKADDY QATADGKLTR
DGKAVETTLE IKPLQKPEAD NELWLITLAQ PLK
|
|---|
| |