Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0997 |
Symbol | |
ID | 8529371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1072596 |
End bp | 1075403 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | TonB-dependent receptor plug |
Protein accession | YP_003258421 |
Protein GI | 261820315 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAATT TTTTGGGGAT GCGTAACACA ATTTGGCCGA TAGCCGTTCT CACTCTGGCG TTAAGCGGAG GCAGTTCGGC GTTTGGTGCA ACAGCACAAT CAATACACCT TCCTGCACAG TCATTGGAAA AATCGTTAAC ACAATTGGCG CGGCAGACCG GTGTCAACTT TGGGGTTGAT AGCCAACTGG TTGCAGGAAA ACAAGCCCCC GCGCTGGAAG GGAACTACAC GGTTGAGCAG GCTTTGGATC GGTTATTGAA CAGTAATAAC CTTTATGCAG AGCCTACAGA CGCCGGTAAA GCGTTTATCA TTCGCCCAAT GGCTAGTATG TCGGCGTCGG ATGAGGCTCA GACGGTAAAT ATGAGCGCAG CGAATAATCG TTCGGGAACC GAAAACAGCG GCGATGTGAT CACGGTAAAA GCGCAGATTT CGCCGGGACC GATGGAGATC GGTAGTCAGC AGTTGGTGGC CGAGGAGATC GCAAAAAAGC CGACCGCTAA TGGAAATATT ACTGAATTGC TGCGCACCAA TCCAAACGTG CAATTCTCTG AAACGTCACG TAATAGTGAG ACACCTGGAG AACTGGCTCC TGACGTTGTT TCGTTCCACG GTGAGAAGTT CTATAACAAC AACTTCATGA TCGATGGGAT GTCGAACAAC GATCGTCTGA ACCCAGGCGT GAATGTCGGT GAGGTTGGGG CTGTCGCCAA TGGGAACTCT GCTAATGATT TCCCTTCTGG CCACCCTGAA TCCTTCTGGA TTGATAGCAG CCTGATTGAA AGCTTGTCCG TTTATGACAG CAACGTATCG GCGAAGTATG GCCAGTTCAC CGGTGGTGTC ATTGATGCAA AACTTAAAAA ACCGTCGTTT ACCGAGCCAT CCGGTTCTGT CTCTTACCGA ACAACGCGTT CATCATGGAC GAAATATCAT CTGGAGAAAA AAGAGGAAGC CTCGTTTAGT GCCGCAACCA CGCTTAAGAG GCAGCCTAAA TTTACCAAAA ATTTTTATAA CCTGAACGTT AGCCAGCCCC TTAATGATAA TGCGGCGCTG ATGTTTGTGT ATAGCCGTAA GGAATCTGAC ATCCCATTCT GGCATACGAT TTTCCAACGA TGGGAAGATC AATCACGCGA ATCCGAAACC TATATGTTAC GTGGTGCGTG GGATGCGAAT GAACGGAACC AATTTAGCTT ATCACTCATG CATTCACCCC ATAGTGCAAG CTATGTGCGT AGTAATATGA AGGATGGTAA TTTTACTGCT GAAGGTGGTG GATATAGCGC CAATCTGAAG TGGGATAACC AGAATAAATG GGGAGAAGTT GCCACACAGT TAATTTGGAA GCAGAACGAA AATACCATCA AGAATAAAGA AGATAACTTT TATGCTTGGG CTAAAACAAA CAGTATTGAC TGGGTATCGA GCTATTCTGG ATCTGCCGCT CAGGAAGGGG GAGATGGCAC GGTAAGAACC GAGCAGTCGG GTATTAATTT TAAGCAGGAT TGGCAGCTAA ATCCTTTTTC TACCTGGGAT ATACAGCACC AGTTTGATTT TGGTGTTGAT ACCGATTTTT CCAAAGCTCG CTATCAACGT AAAGACACAT CTTACCGCTA TGGCGTGGCA GTCAAAAACG CCGCGATAGT ATGTAAAAGC GGTGATTCAG CCTGTATCAA TGGTGAACAA TACCTCAGCC AAAGAGCGGT TTATGAAGCA TCTGATGTAA GCGTAGCTGC TAGCACTTAC GCGGCTTATT TACAGGATAC GCTGACTGCT TCCCGTTTAA CGATGGTACC TGGCGTTCGC GTTGATTATG ACGACTACAT GAAAAACATG AACGTTTCAC CACGCTTCAG CACCAGTTAT GACGTTTGGG GCGATCGTTC CACTGAGGTT TTCGGCGGAG TGAACCGTTA TTATGCAGGT AATGTGTTGG CCTATAAATT GCGTGAAGCG CGTAAGCAAC CGTATAACGA ATGTCGAGCT AATACGCTGA CCAAGAGTGG TGGATGTACC CAAAAATCAA CGAATGTAAC GCCCGATGAG TGGGTCTTTG GTAAGGAGCT TAACCAAGCT AATTACCGAT ACACGTCATT AAATACTCCC TACAGTGATG AACTCAATCT CGGTGTGCAG CAGCGTATTT ATGATTCAGT CTGGACGTTG AAATGGGTTC ACCGTGAAGC AAAAGATCAA TTTTCTGCTG AGCGAGATAA AACGACAAAA ATTTATGAAC TCACTAATAA CGGTAAATCT GAATCCGACA CGTTCAGCTT GATGGTCAAG CCTGTTTCTC CCATTGAATG GAATTCTGCG GTATTCAGTT GGTCGGCGGG AGCGAATATT CATAAAAGTA CTTCCTCAAA TAAGGACTAT GACACCGAGG CAGATCTCGA TGGCTATATT CTCTACAACG GAAAAATGAT CCGCGCGATT GATAAACCCG CTGATAATTT CAATCGCCCC TGGACGGCGT TTCTTGAGCT GAATACTGAA ATACCCAACT GGCGTTTAGA TTGGACACAG CGTTTAAGTT ATGTCGGTGG GTATAAAGCC ATGAAGCGTA CTGAAACTAT TAACTGTCCA GATGATGACC GCTGTTCCGG GTATGTCGGT GCTACCGATG TGTATGAAGA AGATCAATAT GGCAACAATA TGTTGTTGGA TTGGCGTGTC GCTTATACCC AGCCATTAGG TAAGCAGAAT CTAAAAGTGG GCGTAGATGT ACTTAATGTC CTGAATAAAG CCAACAAGAA CGAATCTAAT TATGGATTGG GTCGTCAATT CTGGCTGGAT GTGACGTATT CATGGTAA
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Protein sequence | MRNFLGMRNT IWPIAVLTLA LSGGSSAFGA TAQSIHLPAQ SLEKSLTQLA RQTGVNFGVD SQLVAGKQAP ALEGNYTVEQ ALDRLLNSNN LYAEPTDAGK AFIIRPMASM SASDEAQTVN MSAANNRSGT ENSGDVITVK AQISPGPMEI GSQQLVAEEI AKKPTANGNI TELLRTNPNV QFSETSRNSE TPGELAPDVV SFHGEKFYNN NFMIDGMSNN DRLNPGVNVG EVGAVANGNS ANDFPSGHPE SFWIDSSLIE SLSVYDSNVS AKYGQFTGGV IDAKLKKPSF TEPSGSVSYR TTRSSWTKYH LEKKEEASFS AATTLKRQPK FTKNFYNLNV SQPLNDNAAL MFVYSRKESD IPFWHTIFQR WEDQSRESET YMLRGAWDAN ERNQFSLSLM HSPHSASYVR SNMKDGNFTA EGGGYSANLK WDNQNKWGEV ATQLIWKQNE NTIKNKEDNF YAWAKTNSID WVSSYSGSAA QEGGDGTVRT EQSGINFKQD WQLNPFSTWD IQHQFDFGVD TDFSKARYQR KDTSYRYGVA VKNAAIVCKS GDSACINGEQ YLSQRAVYEA SDVSVAASTY AAYLQDTLTA SRLTMVPGVR VDYDDYMKNM NVSPRFSTSY DVWGDRSTEV FGGVNRYYAG NVLAYKLREA RKQPYNECRA NTLTKSGGCT QKSTNVTPDE WVFGKELNQA NYRYTSLNTP YSDELNLGVQ QRIYDSVWTL KWVHREAKDQ FSAERDKTTK IYELTNNGKS ESDTFSLMVK PVSPIEWNSA VFSWSAGANI HKSTSSNKDY DTEADLDGYI LYNGKMIRAI DKPADNFNRP WTAFLELNTE IPNWRLDWTQ RLSYVGGYKA MKRTETINCP DDDRCSGYVG ATDVYEEDQY GNNMLLDWRV AYTQPLGKQN LKVGVDVLNV LNKANKNESN YGLGRQFWLD VTYSW
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