Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0899 |
Symbol | |
ID | 8529272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 954867 |
End bp | 955847 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Type II secretion system F domain protein |
Protein accession | YP_003258324 |
Protein GI | 261820218 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATT TACGCCTGAA CCTGATTACG CTGCTGGTGT TTTGCAGCGT GCTGATGATG CTTTTGGCGG TCAACGCCTG GAGAAAATCA CGCCAGCAAC GCATGCAGCG TGAACAACGC TGGCAGCAGA TTTTGAACGA GGTTAGCCCA TCGGTAGCCG CAGCAGAGTC TGATTCAATC CTGCGTGACG AGATCAGAAC GCCGCTGATG GGAATTCCTG TTATCGGGCG TTGGTTAGCT ATCCTCTGGG CACAGATGGC GTTCATCGGC TGGAAAAAGA ACCTGCTTCA GCGTTCCCTC TCACTGGCGG CGGCCAGCCT GATACTCGGC ATGATCCTGG GACAACGTAC CCTGCTGCCG CTTACGATGG GACTGATATT TACACTGCTG TTGTTTGTCA GTATCGGCAT GCTGATGTTC CGCTCGACGT TGCAAAAACA CCTGAAAGCG CTGCGTGAGA GCCTGCCGGA AGCGATTGAT GCAATTACGC GCAGTTGCCG GGCGGGCGTG CCCGTCGCGA ATACTTTCTC GATTGTCGCC GAGCACCTGA CCGGGCCGCT GGCGAATGAA TTCAAGACGA TCGATCACTG GCTGCGGCTC GGTATCCCGC TGCGCCAGGT GATTCAGGCC TCGGCGACGC GAGTGCCGAT GGCCGAGTAC CGTTTCTTCG TGGTGATTCT GATCATCAAT CAGGAAGCGG GTGGACGACT AGGAGAAACG CTTGAGCGTT TGTCCGCGAC GCTGCGCGAC CGCCGGGAAC TGCAACTTAA AGTGCAGTCC AAAACCTCTG AAGCGCGCGC ATCAGCCAAG ATTGTCGCCG CACTGTTCCC CGGTTGTCTG GCCTATCTGT ACATGAAGTC GCCGGAGGAT TTCAGTTTTT TGTTCTCCGA TCCGGTGGGA ACGTCGGTAC TGATTTATGC CTTGTGCAGC GTTTCGGTCG GCATGCTGGT GACACACGTT ATGGTTAAAC GGATAGGGTA A
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Protein sequence | MSDLRLNLIT LLVFCSVLMM LLAVNAWRKS RQQRMQREQR WQQILNEVSP SVAAAESDSI LRDEIRTPLM GIPVIGRWLA ILWAQMAFIG WKKNLLQRSL SLAAASLILG MILGQRTLLP LTMGLIFTLL LFVSIGMLMF RSTLQKHLKA LRESLPEAID AITRSCRAGV PVANTFSIVA EHLTGPLANE FKTIDHWLRL GIPLRQVIQA SATRVPMAEY RFFVVILIIN QEAGGRLGET LERLSATLRD RRELQLKVQS KTSEARASAK IVAALFPGCL AYLYMKSPED FSFLFSDPVG TSVLIYALCS VSVGMLVTHV MVKRIG
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