| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0625 |
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| Symbol | |
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| ID | 8528990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 666806 |
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| End bp | 668470 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | type IVB pilus formation outer membrane protein, R64 PilN family |
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| Protein accession | YP_003258056 |
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| Protein GI | 261819950 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAT TTACCCCGCA TTTTACATAC CGGAACGTTG CGCTGGCATT GCTTGTTTCT
ACCGTCCTGA ATGGTTGTGC TACCAACGGG TTTAGGGGGG CAGATGAGCA AGCGGAGCGG
GATATCCGAA CGGCTGAGCA GTTACATGGA TTATCTCGCA CACAGCCTTC CTCTCCTTCA
CTTGTCTGGG TTGACGAGCC CTGGGTCAAT CCCCGTCCTA TTCGTGTCAG TGCACGGGCG
CAACAGGTCA AGTTACCTCC ATGCAGCCTG ACATTGATTA TTGATGGCAG CTTGTCTCTG
TATGAGGTTG GCCAGCGTAT TACCCGCAGT TGCGGGTTCC CTGTTGTGAT AACGCCTGAT
GCCATGAGTG CGCTATCCGG CTCAGCATCA CAGGGGGGCG CTGGGGCGAC TCGCGCTATC
CAAGGGGCAC TTCCTCGTCC GGATGACGGT GGGCGTCCCG CACTGGCCAG TATTGGCGGC
GTAACGTCTA CCTCGTCATT TTCACCGAAT ATCGGTGCGG GACTGATTAC TGATATCAGT
TGGGAAGGTG AGCCTCTCGG TGGGGCACTG GACCAAATCA CATCGCGTAC GGGGCTTAAC
TGGAAATTCG AAAACAATCA GGTGGTGCTG TATTACCTGG ACACGCGAAC TTACCGATTA
AAGGTTCTCA ACGCTGAAAC ATCCATGAAT TCCAACTTGA CCGGCACTAG TAGCTCGACA
GCCGGAGGTG ATAATAGCTC GGTAAGCGGC AGCCAGAATT CAGGACAGAG CACTAGCGTT
AAGCTGGAAA GCAAAATTCA TAATGACATC GGTCAATCCA TTAAGTCGAT GATCAGTCCA
TCGGGGAACT GGCACCTTTC TGGTTCAACG GGCGAACTTG TTGTAACAGA TGTTCCCCAG
GTACTGGACA GAGTTGAGGG TTATATCGAC AACCTGAATG TGCGTATGAA TCGGATGGTC
AAGCTTATGG TCAGCGTCTA TTCGGTTCAG CGCAAAGGTT CCAGTCAGAC GTCACTGGAC
TGGTCTGTCG TTGCTAAGCG TCTCGATCGA TTTGGCTTAA CGTTGGCAGG GACGCCAACG
GCTACTACTT CGATTTCATC CGCAGGTATC AATGTTATTG ATGGAAAATT TGCAGGCACG
ACGGCGTTGT TTCGGGCGTT AGAGACGCAA GGCAAGGTGT CTGTTGTGAT GGCTCATGAG
GCAACGACGA CTAATTTGGT TCCTGCACCA TTTCAGATTG CGGGGCAAAT GGTTTACCTG
CGTAACCAGA AAACAACTGT GTCTGAAAAT TATGCCACGA CGGACATGGA ACCCGGAAGC
ATCACTACGG GGACGCAGAT GACGCTATTG CCTGATATCC GTGATGAGGG GGATATCCAA
CTGCAATTTA ACTTCAGTCA CTCCGATCCG GCTCAGTTGC GCAAAGAGTC ATCTGAGGAC
GGAAGAACCA AAATGGAGAT GCCGTATACC ACCGTGCGGA GCTTAAGTGA ACGGGTTAAT
CTGAGGCCGG GTCAGACGTT GATCGTCAGT GGTTATAACT CGCGCAATCT GACTACATCT
CGGGAAGGCG CATTTGATCC TGATGTCACT GTCGCCGGCG GTGGTAAATC AAGTGAAACG
GATGATGTCA CCCTGATCAT CGCCGTTACG CCAGTTCTGA TGTGA
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| Protein sequence | MSQFTPHFTY RNVALALLVS TVLNGCATNG FRGADEQAER DIRTAEQLHG LSRTQPSSPS
LVWVDEPWVN PRPIRVSARA QQVKLPPCSL TLIIDGSLSL YEVGQRITRS CGFPVVITPD
AMSALSGSAS QGGAGATRAI QGALPRPDDG GRPALASIGG VTSTSSFSPN IGAGLITDIS
WEGEPLGGAL DQITSRTGLN WKFENNQVVL YYLDTRTYRL KVLNAETSMN SNLTGTSSST
AGGDNSSVSG SQNSGQSTSV KLESKIHNDI GQSIKSMISP SGNWHLSGST GELVVTDVPQ
VLDRVEGYID NLNVRMNRMV KLMVSVYSVQ RKGSSQTSLD WSVVAKRLDR FGLTLAGTPT
ATTSISSAGI NVIDGKFAGT TALFRALETQ GKVSVVMAHE ATTTNLVPAP FQIAGQMVYL
RNQKTTVSEN YATTDMEPGS ITTGTQMTLL PDIRDEGDIQ LQFNFSHSDP AQLRKESSED
GRTKMEMPYT TVRSLSERVN LRPGQTLIVS GYNSRNLTTS REGAFDPDVT VAGGGKSSET
DDVTLIIAVT PVLM
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