Gene Pecwa_0045 details

Gene Information

• Locus tag: Pecwa_0045
• ID: 8528395
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 50009
• End bp: 50731
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 50%
• Product: DNA-binding transcriptional activator DcuR
• Protein accession: YP_003257521
• Protein GI: 261819415

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAATG TACTGATTGT TGATGACGAT GCCATGGTTG CAGAGCTTAA CAAATCTTAT 
CTGAACCAGG TTTCTGGATT TAGCTGCTAT GCGACTGTCC CCACGTTGCA GCAGGCGCGC 
AACCTGCTGA TGCAACCTGA CTCGGAAATC GATTTGGTAC TGCTGGATAT TTACATGCAG 
CAGGATAATG GACTGGATCT GCTGCCGACT ATCCGTGAAT TCAGTGAAAA GACGGATGTC 
ATCATCATCT CTTCTGCCAG CGACGTGTAT ACTATCAAAA AAGCGCTGCA CTACGGCGTG 
GTGGATTATC TGATTAAGCC TTTCCAGTTT TCGCGTTTCG AACAGGCGCT TACCGCCTAT 
CGCGAAGAAG CGAACTTGTT CAAGCACCGC GATTTTGTTG CGCAGTCGGA CATTGATAGT 
CTGATTCGCC GCACCAGCGG TAGCACGGCC AGCGAGCGCA AGAAATTGCC GAAAGGGCTG 
ACCAGCCTGA CATTGCGTAC CGTCTGCGAG TGGATTGAAG GCAATCAGGG CATCGAGTTC 
TCTACCGAAA TGCTGGCCAA TGCGATTGGC ATTTCGCGCG TTTCCTGCCG TAAATACCTG 
ATTTACCTGT CTGACACCAA TATCCTGACC ACCAATATCC TGTACGGTTC GACGGGGCGG 
CCGGTTTACC TGTATCGCCT GTTGCCAGAA AAGCAGGACT CATTGCGTCA GTACTGTGAA 
TGA 

 

Protein sequence

MINVLIVDDD AMVAELNKSY LNQVSGFSCY ATVPTLQQAR NLLMQPDSEI DLVLLDIYMQ 
QDNGLDLLPT IREFSEKTDV IIISSASDVY TIKKALHYGV VDYLIKPFQF SRFEQALTAY 
REEANLFKHR DFVAQSDIDS LIRRTSGSTA SERKKLPKGL TSLTLRTVCE WIEGNQGIEF 
STEMLANAIG ISRVSCRKYL IYLSDTNILT TNILYGSTGR PVYLYRLLPE KQDSLRQYCE