More than 300 homologs were found in PanDaTox collection
for query gene Pecwa_0045 on replicon NC_013421
Organism: Pectobacterium wasabiae WPP163



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013421  Pecwa_0045  DNA-binding transcriptional activator DcuR  100 
 
 
240 aa  494  1e-139  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0039  DNA-binding transcriptional activator DcuR  97.92 
 
 
240 aa  484  1e-136  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3909  DNA-binding transcriptional activator DcuR  92.08 
 
 
240 aa  463  9.999999999999999e-131  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4101  DNA-binding transcriptional activator DcuR  92.5 
 
 
240 aa  461  1e-129  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1958  DNA-binding transcriptional activator DcuR  68.6 
 
 
237 aa  328  4e-89  Serratia proteamaculans 568  Bacteria  normal  normal  0.0209132 
 
 
-
 
NC_009436  Ent638_2556  DNA-binding transcriptional activator DcuR  60 
 
 
239 aa  300  9e-81  Enterobacter sp. 638  Bacteria  normal  normal  0.109677 
 
 
-
 
NC_011205  SeD_A4698  DNA-binding transcriptional activator DcuR  57.92 
 
 
239 aa  290  2e-77  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4558  DNA-binding transcriptional activator DcuR  57.92 
 
 
239 aa  290  2e-77  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4649  DNA-binding transcriptional activator DcuR  57.92 
 
 
239 aa  290  2e-77  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4649  DNA-binding transcriptional activator DcuR  57.92 
 
 
239 aa  290  2e-77  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.420528  normal  0.899721 
 
 
-
 
NC_011149  SeAg_B4566  DNA-binding transcriptional activator DcuR  57.92 
 
 
239 aa  290  2e-77  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03995  DNA-binding response regulator in two-component regulatory system with DcuS  56.25 
 
 
239 aa  283  1.0000000000000001e-75  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3868  response regulator receiver and unknown domain protein  56.25 
 
 
239 aa  283  1.0000000000000001e-75  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03956  hypothetical protein  56.25 
 
 
239 aa  283  1.0000000000000001e-75  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3903  DNA-binding transcriptional activator DcuR  56.25 
 
 
239 aa  283  1.0000000000000001e-75  Escherichia coli ATCC 8739  Bacteria  normal  0.71711  normal 
 
 
-
 
NC_010498  EcSMS35_4591  DNA-binding transcriptional activator DcuR  56.25 
 
 
239 aa  283  1.0000000000000001e-75  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4678  DNA-binding transcriptional activator DcuR  56.25 
 
 
239 aa  283  1.0000000000000001e-75  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5638  DNA-binding transcriptional activator DcuR  56.25 
 
 
239 aa  283  1.0000000000000001e-75  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4365  DNA-binding transcriptional activator DcuR  56.25 
 
 
239 aa  283  1.0000000000000001e-75  Escherichia coli HS  Bacteria  normal  0.414132  n/a   
 
 
-
 
NC_005945  BAS0546  response regulator  46.12 
 
 
235 aa  208  5e-53  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000213708  n/a   
 
 
-
 
NC_011725  BCB4264_A0615  response regulator  46.12 
 
 
235 aa  207  9e-53  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0488  response regulator  45.69 
 
 
235 aa  207  1e-52  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0633  response regulator  45.69 
 
 
235 aa  207  1e-52  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK0490  response regulator  45.69 
 
 
235 aa  206  2e-52  Bacillus cereus E33L  Bacteria  hitchhiker  0.00461557  n/a   
 
 
-
 
NC_011772  BCG9842_B4724  response regulator  45.26 
 
 
235 aa  204  1e-51  Bacillus cereus G9842  Bacteria  normal  0.240866  normal 
 
 
-
 
NC_010184  BcerKBAB4_0491  response regulator receiver  45.05 
 
 
235 aa  202  4e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0640  response regulator  45.05 
 
 
235 aa  200  1.9999999999999998e-50  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1119  response regulator  42.5 
 
 
241 aa  199  3e-50  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.704841 
 
 
-
 
NC_009674  Bcer98_0497  response regulator receiver  43.24 
 
 
235 aa  194  1e-48  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0577  response regulator  44.8 
 
 
224 aa  192  3e-48  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4310  response regulator receiver and unknown domain protein  41.49 
 
 
241 aa  186  2e-46  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000453171  n/a   
 
 
-
 
NC_008261  CPF_0512  two-component response regulator  37.95 
 
 
222 aa  163  2.0000000000000002e-39  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1376  response regulator receiver and unknown domain protein  36.68 
 
 
226 aa  163  3e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008262  CPR_0501  two-component response regulator  38.67 
 
 
222 aa  163  3e-39  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0514  response regulator receiver and unknown domain protein  35.81 
 
 
227 aa  162  3e-39  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4644  response regulator receiver and unknown domain protein  35.5 
 
 
231 aa  157  2e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0210142  n/a   
 
 
-
 
NC_007963  Csal_0699  response regulator receiver/unknown domain-containing protein  37.72 
 
 
246 aa  153  2e-36  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00647598  n/a   
 
 
-
 
NC_004116  SAG1922  response regulator  36.64 
 
 
229 aa  149  4e-35  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2788  response regulator receiver and unknown domain protein  35.78 
 
 
230 aa  148  6e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_0598  response regulator receiver and unknown domain protein  39.74 
 
 
223 aa  147  1.0000000000000001e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00972259 
 
 
-
 
NC_008554  Sfum_3992  response regulator receiver/unknown domain-containing protein  35.4 
 
 
231 aa  145  7.0000000000000006e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000025564  normal 
 
 
-
 
NC_008740  Maqu_2899  response regulator receiver/unknown domain-containing protein  36.12 
 
 
228 aa  144  1e-33  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1397  response regulator receiver/unknown domain-containing protein  38.36 
 
 
228 aa  142  4e-33  Arthrobacter sp. FB24  Bacteria  normal  0.362742  n/a   
 
 
-
 
NC_008726  Mvan_3504  response regulator receiver/unknown domain-containing protein  36.12 
 
 
221 aa  139  3e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0894605 
 
 
-
 
NC_013235  Namu_1163  response regulator receiver and unknown domain protein  35.24 
 
 
231 aa  139  3.9999999999999997e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3002  response regulator receiver/unknown domain-containing protein  36.36 
 
 
221 aa  139  3.9999999999999997e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0266393 
 
 
-
 
NC_011830  Dhaf_1239  response regulator receiver and unknown domain protein  37.99 
 
 
225 aa  135  8e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0291668  n/a   
 
 
-
 
NC_009783  VIBHAR_02430  response regulator  34.22 
 
 
228 aa  135  8e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_25720  response regulator of citrate/malate metabolism  34.65 
 
 
231 aa  134  9.999999999999999e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1864  response regulator receiver/unknown domain-containing protein  34.8 
 
 
230 aa  133  1.9999999999999998e-30  Psychromonas ingrahamii 37  Bacteria  normal  0.134891  normal  0.12527 
 
 
-
 
NC_011773  BCAH820_0616  response regulator  33.19 
 
 
230 aa  132  5e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009077  Mjls_3250  response regulator receiver/unknown domain-containing protein  36.12 
 
 
220 aa  132  5e-30  Mycobacterium sp. JLS  Bacteria  normal  0.237703  normal 
 
 
-
 
NC_008541  Arth_1528  response regulator receiver/unknown domain-containing protein  33.19 
 
 
236 aa  132  6e-30  Arthrobacter sp. FB24  Bacteria  normal  0.827563  n/a   
 
 
-
 
NC_011312  VSAL_I2186  HTH-type transcriptional regulator, two-component response regulator  33.19 
 
 
224 aa  131  7.999999999999999e-30  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8199  response regulator receiver and unknown domain protein  34.96 
 
 
226 aa  131  7.999999999999999e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3239  response regulator receiver/unknown domain-containing protein  36.12 
 
 
220 aa  131  7.999999999999999e-30  Mycobacterium sp. MCS  Bacteria  normal  0.926137  n/a   
 
 
-
 
NC_008705  Mkms_3301  response regulator receiver/unknown domain-containing protein  36.12 
 
 
220 aa  131  7.999999999999999e-30  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0147948 
 
 
-
 
NC_013595  Sros_8064  response regulator of citrate/malate metabolism  36.56 
 
 
224 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2442  response regulator receiver and unknown domain protein  35.96 
 
 
227 aa  131  1.0000000000000001e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0939  response regulator receiver  32.16 
 
 
226 aa  130  1.0000000000000001e-29  Shewanella baltica OS195  Bacteria  normal  normal  0.0896662 
 
 
-
 
CP001509  ECD_00590  DNA-binding response regulator in two-component regulatory system with citA  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3005  response regulator receiver and unknown domain protein  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3024  two-component response regulator DpiA  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Escherichia coli ATCC 8739  Bacteria  normal  0.284092  normal 
 
 
-
 
NC_009800  EcHS_A0671  two-component response regulator DpiA  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Escherichia coli HS  Bacteria  hitchhiker  0.00334128  n/a   
 
 
-
 
NC_008321  Shewmr4_3095  response regulator receiver/unknown domain-containing protein  32.16 
 
 
226 aa  130  2.0000000000000002e-29  Shewanella sp. MR-4  Bacteria  normal  0.0654926  normal 
 
 
-
 
NC_009801  EcE24377A_0643  two-component response regulator DpiA  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Escherichia coli E24377A  Bacteria  normal  0.0236338  n/a   
 
 
-
 
NC_009665  Shew185_0905  response regulator receiver  32.16 
 
 
226 aa  130  2.0000000000000002e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0708  two-component response regulator DpiA  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.767771  normal 
 
 
-
 
NC_012892  B21_00579  hypothetical protein  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0639  two-component response regulator DpiA  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E0535  two-component response regulator DpiA  31.56 
 
 
226 aa  130  2.0000000000000002e-29  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0473  response regulator receiver  33.48 
 
 
230 aa  130  2.0000000000000002e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1209  response regulator  36.12 
 
 
228 aa  130  2.0000000000000002e-29  Vibrio cholerae O395  Bacteria  decreased coverage  0.000538312  n/a   
 
 
-
 
NC_013456  VEA_003320  transcriptional regulatory protein CitB  33.93 
 
 
228 aa  129  4.0000000000000003e-29  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0621  DNA-binding response regulator  32.31 
 
 
230 aa  128  6e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0877  response regulator receiver/unknown domain-containing protein  32.6 
 
 
226 aa  128  6e-29  Shewanella sp. MR-7  Bacteria  normal  0.452942  normal 
 
 
-
 
NC_013595  Sros_3868  putative response regulator ofcitrate/malate metabolism  32.61 
 
 
223 aa  128  8.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0941559  normal  0.017891 
 
 
-
 
NC_011772  BCG9842_B4743  response regulator  33.48 
 
 
230 aa  128  1.0000000000000001e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0596  response regulator  32.47 
 
 
230 aa  127  1.0000000000000001e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1040  response regulator receiver and unknown domain protein  34.51 
 
 
228 aa  127  1.0000000000000001e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3431  response regulator receiver/unknown domain-containing protein  32.16 
 
 
226 aa  127  1.0000000000000001e-28  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0471  response regulator  32.9 
 
 
230 aa  127  2.0000000000000002e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0930  response regulator receiver  31.72 
 
 
226 aa  127  2.0000000000000002e-28  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0689  response regulator  32.9 
 
 
230 aa  126  4.0000000000000003e-28  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2259  response regulator receiver and unknown domain protein  34.65 
 
 
223 aa  124  2e-27  Geodermatophilus obscurus DSM 43160  Bacteria  hitchhiker  0.00555688  n/a   
 
 
-
 
NC_009457  VC0395_A0317  transcriptional regulator CitB  31.17 
 
 
230 aa  122  5e-27  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0064  response regulator receiver and unknown domain protein  35.04 
 
 
238 aa  122  6e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.803731  normal 
 
 
-
 
NC_011080  SNSL254_A0681  two-component response regulator DpiA  29.91 
 
 
226 aa  122  7e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0812  response regulator receiver  33.33 
 
 
225 aa  121  9e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4415  response regulator receiver/unknown domain-containing protein  33.76 
 
 
241 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_37850  response regulator of citrate/malate metabolism  35.47 
 
 
227 aa  120  1.9999999999999998e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.277898 
 
 
-
 
NC_011094  SeSA_A0785  two-component response regulator DpiA  29.46 
 
 
226 aa  120  1.9999999999999998e-26  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.124053  normal  0.689385 
 
 
-
 
NC_011149  SeAg_B0667  two-component response regulator DpiA  29.46 
 
 
226 aa  120  1.9999999999999998e-26  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.182273  n/a   
 
 
-
 
NC_009832  Spro_3172  response regulator receiver/unknown domain-containing protein  31.74 
 
 
228 aa  120  1.9999999999999998e-26  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00871756  normal 
 
 
-
 
NC_011083  SeHA_C0741  two-component response regulator DpiA  29.46 
 
 
226 aa  120  1.9999999999999998e-26  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.21792  normal 
 
 
-
 
NC_011886  Achl_1528  response regulator receiver and unknown domain protein  32.35 
 
 
237 aa  120  1.9999999999999998e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000318963 
 
 
-
 
NC_005945  BAS0870  response regulator  33.33 
 
 
225 aa  119  3e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1090  response regulator  33.33 
 
 
225 aa  119  3e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1005  response regulator  33.33 
 
 
225 aa  119  3e-26  Bacillus cereus AH820  Bacteria  n/a    unclonable  1.38637e-62 
 
 
-
 
NC_011725  BCB4264_A0966  response regulator  34.06 
 
 
225 aa  120  3e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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