Gene Pden_5122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5122 
Symbol 
ID4583683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp639347 
End bp639820 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content63% 
IMG OID639772425 
ProductAsnC family transcriptional regulator 
Protein accessionYP_918878 
Protein GI119387844 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATC TGGACCTGAT CGACCGCAAG ATCGTGGCGG AGCTGATGCG CGATGCGACC 
TTGCCCATCG CGCAGATCGC CGAGAAAGTG GGCTTGTCGC AGACGCCTTG CTGGAAACGG
ATACAAAAGC TCGAGGCGCT GGGCGTGCTG ACCGGGAGGG TGGCGCTGGC CGATCCCGCC
AAGCTGGGAT TCGGCATCCT GGTCTTCGTC GAGATCGAGG CGCCGAATCA TTCGCTGGAA
TGGCGCGAGG AATTCACCCG CGCCGTTGCC CAGCTGCCCG AGATCATGGA GGTCTACCGC
ATGGCGGGGC GGATGGATTA CATGCTGCGC GTGGCGGTGC CGGACATGGC CGCCTTCGAT
CTGTTCTACA AGCGGCTGAC GGATGCCGTG CCGATCAAGA ACGTCACCTC GCATTTCTCG
ATGGAGCGCA TCCACTTCAG CACCGCCTAT CCCGTCGATA CCCGCAACCG CTGA
 
Protein sequence
MQDLDLIDRK IVAELMRDAT LPIAQIAEKV GLSQTPCWKR IQKLEALGVL TGRVALADPA 
KLGFGILVFV EIEAPNHSLE WREEFTRAVA QLPEIMEVYR MAGRMDYMLR VAVPDMAAFD
LFYKRLTDAV PIKNVTSHFS MERIHFSTAY PVDTRNR