| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5079 |
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| Symbol | |
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| ID | 4583640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 592864 |
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| End bp | 593532 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639772382 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_918835 |
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| Protein GI | 119387801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0506194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATCAGT TCAACTTCCA GCCAGTTTTC GGCAACCTCG ACCTGCTGCT TTACGGCGCC
TGGCTGACGG TGCGGCTGTC GCTGATGGCC ATGGTGCTGG GGCTGATCGT CTCGGTCCTG
GGCGCGGTCG CCAAGACCTC GGGCATCCGG CCGCTGCGCT GGCTGACCGA TGTCTATGTC
GAGGTGATCC GCAACACGCC GTTCCTGGTG CAGATCTTCT TCATCTTCTT CGGCCTGCCC
GCCGCCGGCA TCAGCATGTC GCCGAACACC GCCGCGCTGG TCGCGCTGGT GGTCAATGTC
GGCGCCTATG GCACCGAAAT CATCCGCACC GGCATCGAAT CGATCCCCCG CGGCCAGATC
GAGGCGGGAC GGGCGCTTGG CCTCAGCCCC GTGCAGATCT TTCGCCATGT CGTGATGATC
CCGGCGCTGC GCAACATCTA TCCCTCGCTG ACCAGCCAGT TCATCTATCT GATGCTGACC
TCCAGCGTGG TCTCGATCAT CTCGGCCAAC GACCTTGCCT CGGCGGGGGC GGACCTGAAC
GCCCGCACCT TTGCCAGCTT CGAGATCTAT CTGGTGCTGA CCATCCTGTA TTTCCTGCTG
GCGCTGGGCT TCTCGACCAT GTTCGGCGCC ATCCGCCGCG TCTTCTTCAC CTATCCCGCG
AGCCGCTGA
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| Protein sequence | MYQFNFQPVF GNLDLLLYGA WLTVRLSLMA MVLGLIVSVL GAVAKTSGIR PLRWLTDVYV
EVIRNTPFLV QIFFIFFGLP AAGISMSPNT AALVALVVNV GAYGTEIIRT GIESIPRGQI
EAGRALGLSP VQIFRHVVMI PALRNIYPSL TSQFIYLMLT SSVVSIISAN DLASAGADLN
ARTFASFEIY LVLTILYFLL ALGFSTMFGA IRRVFFTYPA SR
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