Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5018 |
Symbol | |
ID | 4583579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 529599 |
End bp | 530375 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639772321 |
Product | hydroxypyruvate isomerase |
Protein accession | YP_918774 |
Protein GI | 119387740 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.189718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGGT TTTCGGCGAA TCTGGGTTTT CTGTGGGCCG ACCTGCCGCT GCCGCAGGCG ATCCGCGCCG CCCATCGCGC CGGTTTCGAC GCGGTGGAAT GCCACTGGCC CCATGAGGTG CCGCCCGAAC AGGTCGCGGC CGCGCTGGCC GAGACCGGGC TGCCGATGCT GGGCCTGAAC ACCCGGCGCG GCCGGCCGGG CGAGAACGGC CTTGCCGCCC TGCCGGGACG CGAGGCCGAG GCCCGGGACG AGATCGGACG CACGCTGGAC TATGCCGCCG CCATCGGCTG CGGCGCGGTC CATGTCATGG CGGGCTCTGC CGAAGGGCAG GCGGCCGAGC GGGTTTTCCT GGCCAATCTT GACCATGCCT GCCGCCTGGC CCGGCCGCTT GGCATCACCA TCCTGATCGA GCCGCTGAAC CGCCATGACG CGCCCGGCTA TTTCCTGGCC GGCTCGGACC AGGCGGCCCG GATCATCGAG GCGGCCGGGC ATGACAACCT GCGGCTGATG TTCGACTGCT ATCACATGCA GATCATGGAG GGCGACATCT CGCGCCGCTT GCGGGCGCAT CTGGGGATAC TCGGGCATGT GCAGATCGCC TCGGTCCCGG ACCGCGGCAC GCCGGATCAT GGCGAGTTGG ACTATCGCCA TGTCTATGCG GTTCTGGACG ACCTGGGCTG GACCCGGCCT CTGGGCGCGG AATACCGGCC CGAAGGACCC ACCGAGGCGA CGCTGGGCTG GCTGCAAGCG CAGCGCTCGG CGGCACGGCG ACAGTAG
|
Protein sequence | MTRFSANLGF LWADLPLPQA IRAAHRAGFD AVECHWPHEV PPEQVAAALA ETGLPMLGLN TRRGRPGENG LAALPGREAE ARDEIGRTLD YAAAIGCGAV HVMAGSAEGQ AAERVFLANL DHACRLARPL GITILIEPLN RHDAPGYFLA GSDQAARIIE AAGHDNLRLM FDCYHMQIME GDISRRLRAH LGILGHVQIA SVPDRGTPDH GELDYRHVYA VLDDLGWTRP LGAEYRPEGP TEATLGWLQA QRSAARRQ
|
| |