Gene Pden_4995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4995 
Symbol 
ID4583556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp506611 
End bp507375 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID639772298 
ProductGntR family transcriptional regulator 
Protein accessionYP_918751 
Protein GI119387717 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.349641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAATC GCGCTTCCAG CAATCCGCAA ACCCCGACAT TCGGCACCCA TGTCGATCTG 
GCCAGGACAT TTCGGACCGA TCCGGCCGAG GCCGATGGCA TGCAGACCCT GCCCGAACAG
CTCAGCGCCA GGATCATGGC GCTGATCATC AACGGCGAGT TCGAACCGGG CCAGCGGTTG
CAGGAAAGCG CGTTGGCCGA ACGGTTCGAG GTCAGCCGCG GCCCGATCAG GGAAGCGTTG
AGGATTCTGG AGCGCGAGGG GCTGGTGACC ATGGCCTCGC GCCGCGGCGC CAGCGTCACC
CGGCTGACCG CCGAGCGGCT GCGCGACATC TTCAACGTGC GCGCGGCGCT GATGGGCATA
TGCGCCGAGG AACTGGCCGA ACGGCGGGAC CCCGAGGTCC CGTCGATCAT GGACGAAGGC
ACCCGGCGCC TGCTGGCGGC CAACGAGGCC GGTGACGAGG AGGAGTTCAT CGCCATCGTC
TATCAACTCA GCATGTATAT CTCGGAGGCG GCCGGCAACG AGATCGCGCG CTCGATCCTG
TTCTCGCTGG GCCGCCAGAC GCTGCCACTG ACGCGGCGCC TGTTCCAGGA CGAGGCCGAA
CGCCTGACCT GGGCCGGCAA CTGGCAGGCG ATCAGCGAGG CGATCCGCGC GGGCGATCCC
GTCCGAGCGC GTCAGGCGGT GCGCAAGCTG CTGGCCGATA TCAGAACGGG AGTTCTGGCC
GTGCACGAGC GTCTCGAAGA AGAGCGACGT TCCGCCGGGT CATAA
 
Protein sequence
MINRASSNPQ TPTFGTHVDL ARTFRTDPAE ADGMQTLPEQ LSARIMALII NGEFEPGQRL 
QESALAERFE VSRGPIREAL RILEREGLVT MASRRGASVT RLTAERLRDI FNVRAALMGI
CAEELAERRD PEVPSIMDEG TRRLLAANEA GDEEEFIAIV YQLSMYISEA AGNEIARSIL
FSLGRQTLPL TRRLFQDEAE RLTWAGNWQA ISEAIRAGDP VRARQAVRKL LADIRTGVLA
VHERLEEERR SAGS