Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4995 |
Symbol | |
ID | 4583556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 506611 |
End bp | 507375 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772298 |
Product | GntR family transcriptional regulator |
Protein accession | YP_918751 |
Protein GI | 119387717 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.349641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCAATC GCGCTTCCAG CAATCCGCAA ACCCCGACAT TCGGCACCCA TGTCGATCTG GCCAGGACAT TTCGGACCGA TCCGGCCGAG GCCGATGGCA TGCAGACCCT GCCCGAACAG CTCAGCGCCA GGATCATGGC GCTGATCATC AACGGCGAGT TCGAACCGGG CCAGCGGTTG CAGGAAAGCG CGTTGGCCGA ACGGTTCGAG GTCAGCCGCG GCCCGATCAG GGAAGCGTTG AGGATTCTGG AGCGCGAGGG GCTGGTGACC ATGGCCTCGC GCCGCGGCGC CAGCGTCACC CGGCTGACCG CCGAGCGGCT GCGCGACATC TTCAACGTGC GCGCGGCGCT GATGGGCATA TGCGCCGAGG AACTGGCCGA ACGGCGGGAC CCCGAGGTCC CGTCGATCAT GGACGAAGGC ACCCGGCGCC TGCTGGCGGC CAACGAGGCC GGTGACGAGG AGGAGTTCAT CGCCATCGTC TATCAACTCA GCATGTATAT CTCGGAGGCG GCCGGCAACG AGATCGCGCG CTCGATCCTG TTCTCGCTGG GCCGCCAGAC GCTGCCACTG ACGCGGCGCC TGTTCCAGGA CGAGGCCGAA CGCCTGACCT GGGCCGGCAA CTGGCAGGCG ATCAGCGAGG CGATCCGCGC GGGCGATCCC GTCCGAGCGC GTCAGGCGGT GCGCAAGCTG CTGGCCGATA TCAGAACGGG AGTTCTGGCC GTGCACGAGC GTCTCGAAGA AGAGCGACGT TCCGCCGGGT CATAA
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Protein sequence | MINRASSNPQ TPTFGTHVDL ARTFRTDPAE ADGMQTLPEQ LSARIMALII NGEFEPGQRL QESALAERFE VSRGPIREAL RILEREGLVT MASRRGASVT RLTAERLRDI FNVRAALMGI CAEELAERRD PEVPSIMDEG TRRLLAANEA GDEEEFIAIV YQLSMYISEA AGNEIARSIL FSLGRQTLPL TRRLFQDEAE RLTWAGNWQA ISEAIRAGDP VRARQAVRKL LADIRTGVLA VHERLEEERR SAGS
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