Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4882 |
Symbol | |
ID | 4583443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 386548 |
End bp | 387327 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639772185 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_918638 |
Protein GI | 119387604 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.947992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGA CCGTCCTTGC AACCCTGCAG GTCCTCGTGG CGGTCATTGC CGTCGCGCTG TGGTGGGTGA TCACCCAGAC GTCGATCCTG GGCGATCCGG CCCGGATCCA GTTCTTTTTC TCGACGCCCG CCGACGTGTT CTGGCAGATC GTGGCCTGGT TCAGGAGCGG CGAGATCTGG CGGCACCTGT GGATCACGCT GATCGAGGCC GCGCTCGCTT TCGTCATCGG TGCGGTGGCC GCGATGATCG CCGGGTTCTG GCTGGCGCGC AGGCCGAAGC TGGCCGCGGT TTTCGACCCC TATGTCAAGG CGGCCAACGC CTTGCCGCGC GTGGTGCTGG CGCCGATCTT CACGCTGTGG TTCGGCCTGG GCATCTGGTC CAAGGTGGCG CTGGGGTTCA CGCTGGTCTT CTTCATCGTG TTCTTCAACG TCTATCAGGG CGTGAAGGAG GTGAACCGGA CCGTCCTGCA GAACGCCCGG ATGCTGGGCA TGTCCGAGCG TCAGTTGCTG CGCCACGTCT ATCTGCCCTC GGCGCTGAGC TGGGTGTTCT CCTCGCTGCA TGTCTCGATC GGGTTCGCCG TGGTCGGCGC GGTCGTGGGC GAATATCTGG GGTCTTCCGC CGGGCTTGGC TACCTGATCG CGCAGGCCGA AGGCATGTTC GACATCGCCG GCGTGTTCGC GGGAATGTTC GTCCTTTCGG CCTTCGTCCT TCTGATCGAC TGGGGGGTGA CGATGGTGGA AAGGAAGCTG CTGGTCTGGC AGCCCGACAA CAATCACTGA
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Protein sequence | MSRTVLATLQ VLVAVIAVAL WWVITQTSIL GDPARIQFFF STPADVFWQI VAWFRSGEIW RHLWITLIEA ALAFVIGAVA AMIAGFWLAR RPKLAAVFDP YVKAANALPR VVLAPIFTLW FGLGIWSKVA LGFTLVFFIV FFNVYQGVKE VNRTVLQNAR MLGMSERQLL RHVYLPSALS WVFSSLHVSI GFAVVGAVVG EYLGSSAGLG YLIAQAEGMF DIAGVFAGMF VLSAFVLLID WGVTMVERKL LVWQPDNNH
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