| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4860 |
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| Symbol | |
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| ID | 4583421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 363004 |
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| End bp | 364224 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639772163 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_918616 |
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| Protein GI | 119387582 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.643864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA AGGTCGTCGT CATCGGTGCG GGCGTCGTCG GCCTGTCCGT CGCGCTGGCG
GCGCAGGCGC GGGGCTTCGC GGTGCAGGTG GTCGACCGCG AGGGGCCGGC GGCGGGCGCC
TCGGCCGGCA ATGCCGGTGC CTTCGCCTTT ACCGACATCC TGCCGCTGGC CTCGCCCCGG
ATCATGCGGC AGGCACCGAA ATGGCTGCTG GACCCGCTGG GCCCGCTGAC CGTGCCGCCT
TCCTACGCGC TGCGGATCGC GCCTTGGATG CTTCGCTTCT GGCGGGCCTG CTCGCCCGCG
CGGGTGCGCG CCTCGACCGC CGCGCAGACG GCGCTGATGG ACCTGTCCAA GGCCGAGCTG
GAGCCCTTTC TTGCCGCGAC CGGAACCCTG CCGATGCTGC GCAAGGAGGG AAACCTCCAG
GTCTATGAAT CGCAGGCCGA GTTCGACGCC TCGCTGCCCG GCTGGCGCGC GCGAGAGGAA
CATGGCATCG CGTTCCGGCA CATGGCGGCG GATGAGATGG CGGGCGTCCA GCCCGGCCTC
GCGCCGCGCT TCACCCATGG CACCTTCACG CCCGGCTGGT ATTCCATCGC CGATCCGCGC
GACTACACGC TGGCGCTGGC CGACCGTTTC CGCGCAAGGG GCGGCGAGAT CGTCATCGCC
GAGGCGACCG GGCTGGCCGA TGACGGGGTG CTGACCGCCT TGGGCAAGCT GACCGGCCGG
GTGGTGCTGG CGGCGGGGGC GTTCTCGCAT CTGCTGGCCC GGACGCTGGG GGTCCGCATC
CCGCTGGAGA CCGAGCGCGG CTACAACACC ACGCTGCCGG CGGATGCCTT CGACCTGCGC
TGCCAGGTCA CCTTCGGGGG GCACGGCTTC GTCATCACGA AACTGTCCTC GGGCATCCGC
GTCGGCGGCG CGGTCGAGCT GGGTGGGTTG AAGCTGCCCC CGAACTACAG GCGGTCCGAG
GCGATGCTGA AAAAGGCCAA GGCGTTCCTG CCGGGGCTCA GGACTACGGG CGGGCAGCAA
TGGATGGGCT TTCGCCCGTC ATTGCCCGAC AGCCTGCCCG CCATCGGCCC CTTGCCCGGC
CATCCGAACG TCGTCTGCGC CTTCGGGCAC GGCCATCTGG GCCTGACGCA ATCGGCGGGC
ACGGCGCGGA TCGTGGCCGG CCTGCTGGCC GGCGAGGATC CCGGCATCGA TCTGGCACCG
TTCTCTCCCG CGCGTTTCTG A
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| Protein sequence | MTGKVVVIGA GVVGLSVALA AQARGFAVQV VDREGPAAGA SAGNAGAFAF TDILPLASPR
IMRQAPKWLL DPLGPLTVPP SYALRIAPWM LRFWRACSPA RVRASTAAQT ALMDLSKAEL
EPFLAATGTL PMLRKEGNLQ VYESQAEFDA SLPGWRAREE HGIAFRHMAA DEMAGVQPGL
APRFTHGTFT PGWYSIADPR DYTLALADRF RARGGEIVIA EATGLADDGV LTALGKLTGR
VVLAAGAFSH LLARTLGVRI PLETERGYNT TLPADAFDLR CQVTFGGHGF VITKLSSGIR
VGGAVELGGL KLPPNYRRSE AMLKKAKAFL PGLRTTGGQQ WMGFRPSLPD SLPAIGPLPG
HPNVVCAFGH GHLGLTQSAG TARIVAGLLA GEDPGIDLAP FSPARF
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