| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4827 |
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| Symbol | |
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| ID | 4583389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 326381 |
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| End bp | 328453 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772131 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_918584 |
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| Protein GI | 119387550 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.497518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGGCCG TGGCGGCCCT GCCCGCCTCT GCGCAGCAGG CCGCAACCCG GAACGCCGGC
GAGGTGATGC TGGACCCGAT CACCGTCAAG GGCCTGTCCC TTGGCTCCGG CCTGGACCTT
CGGGCGCACT CGAACGCCGG CAGCCGCCTG GGGCTGAGCG TGCTGCAGAC GCCGGCCAGC
GTGCAGGTGA TCGAGGCGGA AACGATCCGC CAGCGCGGGC AGCGCGACGT CAACCAGGCC
ATCGTCCAGA ACGGGACCGG CATCAGCTTT CACGGATCCC CCGGCAATGG CGGCACCTCG
TTCAGCATGC GCGGCTTCAA CGGGCACGGG TCGGTGACGC GGCTTTACGA CGGCACGCGG
CTTTATCCCG CGTCGGGCAC CATCTCCTTT CCCTTCGACA GCTGGAACGT GGAGCGCATC
GAGGTCCTGA ACGGTCCCGC CTCGGTGCTG TATGGCGAAG GCGCCGTCGG CGGCGCAATC
AATATCGTCC CGAAACGGCC CCTGACCGAC CGCAGCCGGA ACGAGATCCG TGCGACGCTT
GGCACGGACG GCCAGCGCGG GCTGGCCTTG GGCAGCGCCG GGCCGATCAA CGAGGTCCTG
GCCTACAGCA TCGATGTCAG CGGCACCGCG TCGGACGGCT GGCTGGATCG CAACGACACG
TCCAGCCGCT CGCTGTCGGC AGCGCTGCGC TGGCAGGCGA CCGAGGACCT GGCGCTGACC
CTGTCGCATG ACCATGGCGA CAACCGGCCC GGCACCTATT TCGGAACGCC GCTTGTCGAT
GGCCGGATCG ACGAGCGCGT GCGCCGCCGG AACTTCAACG TCGAGGACGC CCTGGTCCGC
TACAAGGACA GCTATACGCA GTTGCGGGCC GAATGGACGC CGGCCGACAA CGTGACGATC
CGCAGCAACA GCTATTACCT GGCCAGCGAC CGCAATTGGC GCAATGTCGA GGATTACCTC
TATCGACCGG ATACGGGCGA TGTGCTGCGC CAGTTCTACA TCGCGATCAA CCACGATCTG
GAGCAGGTCG GCAACCGCAC CGACGCCACC ATCAGTACCA CGCCCGGCGG AATGGAAAAC
ACCACGACGA TCGGCTTCGA CGTGAACCGG ATCACGTTCA GGAATACCAA CAACTCGCCT
TATCCGGGCG AGTCGGTGGT GGATTTCCCG AACCCGCGAC CCGGCCTCTT CGGCCCGCAT
CAGATGGCGA CGACGGCCGA TACGACCACC GATCAATATG CGCTGTTTCT CGACAACCGG
CTGAAGATCA ACGAGCAATG GTCGGTCGTC GGCGGGCTGC GCCATGACAA TCTGCGCGTC
ACCCGCGTCG AGCCCGCCTT CACCCGCAGC TTCGATTCCG TCAGCTGGCG CCTGGGCGCG
GTCTACAGCC CGCTGCCGGA TGTGGCGATC TATGCCCAGT ATTCCCGCGC GGCCGAGCCG
ATCGGCAATG TCCTGTCGCT ATCCCAGTCG CAGGCGGATC TGAAGCTGGC CAAGGCGCGC
CAGCAGGAAA TCGGGGTGAA ATTCGCCTTT CTGGACGGAC GCGGCGATGC CACGCTGTCG
GCCTATCGGA TCGTCAAGAA CGACCTGCTG GCCCGCGATC CCGACGATCC GGCGATCACC
CGGCAGATCG GCCAGCAAAG CTCGAAGGGG ATCGAGGCGG CGGTCGGGTT CGACGTCGCC
CCGAACCTGC GCATCGACGT GAACGGCGCG CTGCTGTCTC CGCGCTATGA CGATTATGTC
CAGTCCGGCG GCGACTATTC CGGCAATCGC CCGCCCAATG CACCGCGCCG CGTCGCCAAT
ATCTGGGGCT CCTGGGCCTT TGCCGAGGAC TGGACGGTGC GGGCCGGTGC CCATTACGTG
GGCGAGGTGT TCACCAACGA CGCCAACACG ACCTCGCGCC CGTCCTACAC GGTCGTCAAT
GCCGGGCTGC AATGGGTGCC ACGCGACAAC ATGAGCCTCG ATCTCAACAT CTACAACCTG
ACCGACCGGC TCTATGCGAC CTCGGGCGGG TCGAACCAGT GGCTGCTGGC TCCGCCGCGC
AGCGCGGCGC TCGATCTGCG CATCGCCTTC TAG
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| Protein sequence | MLAVAALPAS AQQAATRNAG EVMLDPITVK GLSLGSGLDL RAHSNAGSRL GLSVLQTPAS
VQVIEAETIR QRGQRDVNQA IVQNGTGISF HGSPGNGGTS FSMRGFNGHG SVTRLYDGTR
LYPASGTISF PFDSWNVERI EVLNGPASVL YGEGAVGGAI NIVPKRPLTD RSRNEIRATL
GTDGQRGLAL GSAGPINEVL AYSIDVSGTA SDGWLDRNDT SSRSLSAALR WQATEDLALT
LSHDHGDNRP GTYFGTPLVD GRIDERVRRR NFNVEDALVR YKDSYTQLRA EWTPADNVTI
RSNSYYLASD RNWRNVEDYL YRPDTGDVLR QFYIAINHDL EQVGNRTDAT ISTTPGGMEN
TTTIGFDVNR ITFRNTNNSP YPGESVVDFP NPRPGLFGPH QMATTADTTT DQYALFLDNR
LKINEQWSVV GGLRHDNLRV TRVEPAFTRS FDSVSWRLGA VYSPLPDVAI YAQYSRAAEP
IGNVLSLSQS QADLKLAKAR QQEIGVKFAF LDGRGDATLS AYRIVKNDLL ARDPDDPAIT
RQIGQQSSKG IEAAVGFDVA PNLRIDVNGA LLSPRYDDYV QSGGDYSGNR PPNAPRRVAN
IWGSWAFAED WTVRAGAHYV GEVFTNDANT TSRPSYTVVN AGLQWVPRDN MSLDLNIYNL
TDRLYATSGG SNQWLLAPPR SAALDLRIAF
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