Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4796 |
Symbol | |
ID | 4583358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 291289 |
End bp | 292161 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639772100 |
Product | inner-membrane translocator |
Protein accession | YP_918553 |
Protein GI | 119387519 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.212285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.40666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAC TTTTGCAATT CCTGTTTTCA GGGCTGACGG TGGGCGCGGT CTATGCGCTG GTCGCCCTTG GTTTCACGAT CATCTACAAC GCCTCGGATG TGGTGAACTT CGCCCAGGGC GAGTTCGTCA TGCTGGGCGG CATGATCACA TGGTTTGCCC ATGCCGCCGG GCTGCCGCTG CCGCTGGCGG CGCTGATCGC CATCGTCGCC ACCGCCGCGC TGGGGGTCGC GATCAACAAG CTGGCCATCG AGCCGGCGCG CGGCGCGCCC GTCGTCTCGC TGATCATCAT CACCATCGGC GCCTCGGTCT TTCTGCAAGG CGCGGCGCAG CTGGTGTTCG ACAAGCAGAT CCACAGCTTC CCGGCCTTTT CGGGCGACAC GCCGCTGCGC ATCGGCGGCG CGACGATCCA ACCGCAAAGC CTGTGGGTGA TCGGCGGCGC GCTGGTGGTC TTTGCCGGCC TGTGGCTGTT CTTCACCCGC ACGCTCCTGG GCCGGGCGGT GCTGGCGACC TCGAACAACC GGCTCGCGGC CCAGCTTGTC GGCATCAACA CGAATTTCGT CATGACGCTG TCCTTTGCGC TTTCGGCCGG GATCGGTGCT CTGGCGGGGG TGCTGGCGAC GCCGATCACG CTGACCGCCT ACAATGTCGG CATCGGCTTT GCGCTGAAGG GCTTTGCCGG TGCCATGCTG GGCGGCATGG GCAATCCCAA GGGCGCGCTG GCCGGCGGCT TCCTGATCGG GCTGATCGAG GCGCTGACGG CGGGCTACCT GTCCTCGACC TACAAGGAGG CGGCGGCATT CGTCGTGATC CTGCTGGTCC TGTTCTTCAT GCCGCAGGGC CTGTTCGGCC GCAAATCGAC GGAGCGGGTG TGA
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Protein sequence | MSELLQFLFS GLTVGAVYAL VALGFTIIYN ASDVVNFAQG EFVMLGGMIT WFAHAAGLPL PLAALIAIVA TAALGVAINK LAIEPARGAP VVSLIIITIG ASVFLQGAAQ LVFDKQIHSF PAFSGDTPLR IGGATIQPQS LWVIGGALVV FAGLWLFFTR TLLGRAVLAT SNNRLAAQLV GINTNFVMTL SFALSAGIGA LAGVLATPIT LTAYNVGIGF ALKGFAGAML GGMGNPKGAL AGGFLIGLIE ALTAGYLSST YKEAAAFVVI LLVLFFMPQG LFGRKSTERV
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