| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4714 |
|---|
| Symbol | |
|---|
| ID | 4583217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 202820 |
|---|
| End bp | 203488 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639772018 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_918471 |
|---|
| Protein GI | 119387437 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1926] Predicted phosphoribosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.120595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00895414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCAA GGGGGACGGC GATGTTCGCA GATCGCACGG ATGCCGGACG CCGGCTTGGC
GCCGCACTTT CCGGGCGCCG GGGCGGGTCC GTCCTGGTGC TGGCGCTGCC GCGCGGCGGC
GTGCCGGTCG GGCTTGAGGT CGCAAGGGCC CTGGATGCGC CGCTGGATGT CCTTCTGGTC
CGCAAGATCA CGGCGCCCGC GCATCCCGAA CTGGCCATCG GCGCCGTCGT GGACGGCAGC
ACGCCGCAAC TGCTGCTCGA CGACCAGCTC GTCGCCGCGA CAGGCGCGAC GGCCGAACAT
ATCGCCGCCG AAAAGGCCCG GCAGCTGCGC GAGATCGAGC GCAGGCGGCA GGCCTATCGC
GGCACCCGCC CGGCGCCCGA GATCCGGGGC CGCACCGTGA TCGTGGTCGA TGACGGCATC
GCCACCGGCG CGACCATGCG CATCGCGCTC AGGGCGCTGG CGCGGTCGGG CGCGGCCCGG
GTGATCGTCG CCGTCCCCGT CGCCCCGCCC GATGTGCTGG AGCTGATCCG CGCCGAGGCC
GACGAGGTGG TCTGCCTGCG CACGCCCGAG CCCTTTCATG CGGTGGGCTT TCACTATGAC
GACTTCGACC AGACCAGCGA CGAAGAGGTG GTTCGCGCGC TGGCCGAGGC CGGTCGCGGC
CGGGATTGA
|
|---|
| Protein sequence | MIARGTAMFA DRTDAGRRLG AALSGRRGGS VLVLALPRGG VPVGLEVARA LDAPLDVLLV
RKITAPAHPE LAIGAVVDGS TPQLLLDDQL VAATGATAEH IAAEKARQLR EIERRRQAYR
GTRPAPEIRG RTVIVVDDGI ATGATMRIAL RALARSGAAR VIVAVPVAPP DVLELIRAEA
DEVVCLRTPE PFHAVGFHYD DFDQTSDEEV VRALAEAGRG RD
|
|---|
| |