Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4676 |
Symbol | |
ID | 4583179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 168892 |
End bp | 169983 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639771980 |
Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
Protein accession | YP_918433 |
Protein GI | 119387399 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00322368 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGCC AGGCTGAGAT CCCCGCCGAT GTCGTGGCGC TGTGCGACTA CGAGCGGCAC GCGGCCGAGC GGATGCCCGC GCCGCTGCGG GCCTATGTCG ACGGGGCGGG TGCGGACGGG CTGACCGCCG CCGCCAACCT GGCCGCGTGG CAGGCGATCC GGCTGCAATC GCGCCTGCTT CGCGACATGC GGGGGGCGCA TACCGACCTG CGGCTTTTCG GGCTGGACCT GCCGCATCCG CTGATCCTTG CGCCGGTGGC CTTTCACGGC CTTGCCCATG CCGAGGCCGA ACATGCGACC GCGCTTGGCG CCGCGGCGAC GGGCAGCCTG ATGGTGGTCT CGACCCAGTC CGGCCTGCCG CTGGAGGAGA TTGCGGCGCG CGCGCAGGGG CCCCTGTGGT TCCAGCTTTA CATGCAGCCC CGGCGCGAAG ACACATTGCG CCTCGTTCAC CGGGCCGAGG CGGCGGGCTA TCGTGCGCTG GTCGTGACCT TGGATGCGCC GGTGAACGGA TTGCGCAACA TGGAGCAGCG CGCCGGCTTC CGCCTGCCCG AGGGGCTGCG GGCGGTCAAC CTGGACGGCA TGACCCCGCC CGAGATCCGC AGCGAGCCGG GGCGGGCGGC GACCTTCCTT GGCCTGATGG ATGCCGCCCC GCGCTGGGAG GACATCGGCT GGCTGAAGTC GCAGACCCGG CTGCCGGTGC TGTTGAAGGG CATCATGTCG GCGCATGATG CCGAGCGCGC CGTGGCGGTG GGTGCGGACG GGGTGATCGT CTCGAACCAC GGCGGCCGGG CGCTGGACGG CTTGCCGGCG ACGGCCGAGG CGCTGCCGGT CGTCGCCCGC GCCATCGCGG GCCGCGTGCC GGTGTTGTGC GACGGCGGCA TCCGGCGCGG CACCGATGCG CTGAAGGCGC TGGCCTTGGG GGCATCGGCG GTGCTGATCG GCCGCCCGCA GATCCACGCC CTGGCGGTCG GCGGCGCGGC GGGGGTCGCG CATATGCTGA CCATCCTGCG CGCCGAGTTG GAGGTCGCCA TGGCCCTGAC CGGCCGGCGC GATCTGGCCG GCATCGACGA GAGCGTGATC TGGGGCACCT GA
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Protein sequence | MAGQAEIPAD VVALCDYERH AAERMPAPLR AYVDGAGADG LTAAANLAAW QAIRLQSRLL RDMRGAHTDL RLFGLDLPHP LILAPVAFHG LAHAEAEHAT ALGAAATGSL MVVSTQSGLP LEEIAARAQG PLWFQLYMQP RREDTLRLVH RAEAAGYRAL VVTLDAPVNG LRNMEQRAGF RLPEGLRAVN LDGMTPPEIR SEPGRAATFL GLMDAAPRWE DIGWLKSQTR LPVLLKGIMS AHDAERAVAV GADGVIVSNH GGRALDGLPA TAEALPVVAR AIAGRVPVLC DGGIRRGTDA LKALALGASA VLIGRPQIHA LAVGGAAGVA HMLTILRAEL EVAMALTGRR DLAGIDESVI WGT
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