Gene Pden_4668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4668 
Symbol 
ID4583171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp160296 
End bp161084 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID639771972 
ProductABC transporter related 
Protein accessionYP_918425 
Protein GI119387391 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAG CCGCCATCCC GCGCATTCAA AGCAAGGATT CCCCCGCCAT GTCAGGCTCC 
AGCCAACCGA TGGTCCGCTT CCACAACCTG CGCAAAAGCT ATGGCGCGGT CGAGGTGCTG
AAAGGGATCG ACCTCGAAGT CTCGTCGGGG CAGGTGGTCG CGCTGATCGG CCGCTCCGGC
TCGGGCAAAA GCACCGCGCT GCGTTGCGTG AACGGGCTTG AACGGTTTCA GGCGGGCGAG
TTGCACGTCT GCGGTTACGA CCTGTCCGCC AAGGATCTCA ACCTGCGCAA CCTGCGCCAG
GACGTGGGCA TCGTGTTCCA GAGCTACAAC CTGTTCCCGC ATCTGACGGT CGAACAGAAC
GTGACGCTGG CCCCGCGCAA GGTGAAGGGC GTGGGCCACA CCGAGGCGCG CGAGCTTGCG
AAAGAGGTGC TGGCGCAGGT CGGCCTGTCC GACAAGGTGG ACGCCTATCC CGAACAGCTT
TCTGGCGGCC AGCAACAGCG CGTCGCCATC GCCCGCTCGC TGGCGATGAA GCCCAAGCTG
ATGCTGTTCG ACGAGGTGAC ATCGGCACTG GACCCGGAAC TGACCGGCGA AGTGCTGCGC
ACCATCGAGC GGCTGGCCGC CGATGGCATG ACGATGATGC TGGTGACGCA TGAAATGGCC
TTTGCGCGCT CGGTCGCCGA TCAGGTGGTC TTCATGCATC AGGGCCGCGT CTGGGAAGCC
GGGCCGGGCG ACATGCTGCT GGATCCGCAA ACGGTCGAGC TGCGTCAGTT CGTCGGCAGC
GGGCTCTAG
 
Protein sequence
MNEAAIPRIQ SKDSPAMSGS SQPMVRFHNL RKSYGAVEVL KGIDLEVSSG QVVALIGRSG 
SGKSTALRCV NGLERFQAGE LHVCGYDLSA KDLNLRNLRQ DVGIVFQSYN LFPHLTVEQN
VTLAPRKVKG VGHTEARELA KEVLAQVGLS DKVDAYPEQL SGGQQQRVAI ARSLAMKPKL
MLFDEVTSAL DPELTGEVLR TIERLAADGM TMMLVTHEMA FARSVADQVV FMHQGRVWEA
GPGDMLLDPQ TVELRQFVGS GL