| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4667 |
|---|
| Symbol | |
|---|
| ID | 4583170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 159459 |
|---|
| End bp | 160268 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639771971 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_918424 |
|---|
| Protein GI | 119387390 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATT TCAGAAAGGC CGCCACGGCC GCCGGCCTTG TGCTGGGTAT TGTCACGGGG
CTGGTCGGTC CCGCCGCCGC GGATGTGCCC GCTGCGATCA AGGAACGCGG CAAGGTGCTG
ATCGCCATCG ACGTCAGCCA TCCGCCCTAC GGGATGCTGG ATTCGCAGGC CAGGGAGACC
GGCTCGGACG TCGAGACCGC GAAGCTTCTG GCCGAGGACA TGGGCGTCGC GCTGGAAATC
GTCCCAGTTT CAGGTGCGAA CCGCGTGCCT TCGCTGCTCA GCCGCAAGGT GGACATGGTG
ATCGCATCCT TTTCGATCAC CGAGGAGCGC AAGAAGGTCA TCGACTATTC CCGCCCCTAT
GGCGTGATTC CGGTCGTGAT CTCGGCGCCC CAGGACATGG GCATCGCCGC CCCTGCCGAT
CTGGCCGGTC AGGCCCTTGC CGTTGCACGC GGCACCACCG CCGACATCGA GTTGAGCCGC
ATCGTCAAGG AAAGCGGCGT GAACGCGAGG ATCGTCCGCT ACGAGGACGA GGCGACCACC
AACACCGCCG TCGCCACCGG CCAGCAGAAG ATCCTTGCCG CCGCCCTGTC CACCGCCAAC
GAGGTGTCCG AGCAGAACCC CGGCCTGAAC CTGGAGGTCA AGCTGGACAT GGCCGCCTAT
CCGATGGCCG TCGGCCTGCG CAAAGGTGAC GACGAGCTCA AGGCGTGGGT CGACGAATGG
GTCGGCCAGA ACCTGGAAAA CGGCAAGCTG AACGCGATCT ACGAGAAGTA TTTCCACCAG
CCCCTGCCCG ACGTCATCCC CGAAAGCTGA
|
|---|
| Protein sequence | MMNFRKAATA AGLVLGIVTG LVGPAAADVP AAIKERGKVL IAIDVSHPPY GMLDSQARET
GSDVETAKLL AEDMGVALEI VPVSGANRVP SLLSRKVDMV IASFSITEER KKVIDYSRPY
GVIPVVISAP QDMGIAAPAD LAGQALAVAR GTTADIELSR IVKESGVNAR IVRYEDEATT
NTAVATGQQK ILAAALSTAN EVSEQNPGLN LEVKLDMAAY PMAVGLRKGD DELKAWVDEW
VGQNLENGKL NAIYEKYFHQ PLPDVIPES
|
|---|
| |