Gene Pden_4579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4579 
Symbol 
ID4583318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp62781 
End bp63167 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID639771885 
ProductHxlR family transcriptional regulator 
Protein accessionYP_918338 
Protein GI119387304 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.741474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTAA GCCCCTCCTC CGACCCCGCC GATCCGATGC ACAGCGACTG CCCGGGCCGG 
GACCTGTTCG AACTGATCAC CAGCCGCTGG CCACTGCTGA TCCTCTGGTC GCTGCGGGGC
GGCCCGCAGC GTTTCTACGA GGTCCGCAAT GCGGTCGAGG GCATCAGCGA GCGCGTGCTG
TCCGAGGTGC TGAAGAAGCT GTGCCGTCAC GGGCTGATCA CCCGCCATGT CCAGCCGAGC
GTCCCGCCGA AGGTCAGCTA TGCCCTGACC GGCCTGGGCG AGGGATTGCT GGGCGTCATG
GACGGGCTGA CCGGCTGGAT CGGGCGCGAA CTGGAAAACG TCCAGGCGGC CAAGCGCCGC
TATGACGCGC AGGAAGGGAT GGCATGA
 
Protein sequence
MDVSPSSDPA DPMHSDCPGR DLFELITSRW PLLILWSLRG GPQRFYEVRN AVEGISERVL 
SEVLKKLCRH GLITRHVQPS VPPKVSYALT GLGEGLLGVM DGLTGWIGRE LENVQAAKRR
YDAQEGMA