Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4562 |
Symbol | |
ID | 4583301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 46125 |
End bp | 46862 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771868 |
Product | hemolysin-type calcium-binding region |
Protein accession | YP_918321 |
Protein GI | 119387287 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.478129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAA TCCGTGGCAA TGACGACGAC AACCGCCTGG TCGGCACCAA GTTCGCCGAC CAGATCTGGG GCCGCTCGGG CGACGACCTG CTCTTTGGCC GCGCGGGCAA CGATACGCTG GACGGCGGCG AGGGCAATGA CCGCATCGAC GCCGGCTCGG GCCACAACCG CATCATCGGC GGCTCGGGCA ATGACGTGAT CAAGGCGCTG GGCGGCAACG ACCGGATCAC GGCGGGCGAG GGTAACGATG TCGTGCAAGC CGGGGGCGGC AACAACACGA TCTCGCTCGG CTCGGGCAAC GACCGCTCGG TCAGCGGCGG CGGCCGCGAC ACCATCAGCG GCGGCGAGGG CAACGACACC ATCCGCGCCG GAGGCGGCAA CGACCTGATC CGCGGCGGCG AGGGCGACGA CCGCCTGTTC GGCGAGGCAG GCCACGACCG CATCATCGCG GGCGAGGGCA ACGACACCCT GAACGGCGGC CGGGGCAACG ACACGATGAC CGGCGGCGAG GGTGCCGACG TCTTCGTCTG GAACGGCGGG CGCGACCGGA TCACCGATTT CGACCATGAC GACGACGTGA TCGACCTGTC CTTCTATGGC CGCTTCGACA GTTGGGCCGA CATCCGCGGC GCCGCCAGCC AGGTCGGCGA CAATGTCGTC ATCAGGGCGG GCGCCGACCG GCTGGTGATC GAGGACACGC GCCTCGGCCA GCTTCGCAGC GACGATTTCG ACTGGTAG
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Protein sequence | MARIRGNDDD NRLVGTKFAD QIWGRSGDDL LFGRAGNDTL DGGEGNDRID AGSGHNRIIG GSGNDVIKAL GGNDRITAGE GNDVVQAGGG NNTISLGSGN DRSVSGGGRD TISGGEGNDT IRAGGGNDLI RGGEGDDRLF GEAGHDRIIA GEGNDTLNGG RGNDTMTGGE GADVFVWNGG RDRITDFDHD DDVIDLSFYG RFDSWADIRG AASQVGDNVV IRAGADRLVI EDTRLGQLRS DDFDW
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