Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4550 |
Symbol | |
ID | 4583289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 31432 |
End bp | 33387 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771856 |
Product | acetate--CoA ligase |
Protein accession | YP_918309 |
Protein GI | 119387275 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTG AAACTTCTGG GAAACATCCG ATTCCGCCGG GTTTTGGGGA TGCCCTGGTC CAGCCTGGCG ATTACGCCCG CATGTATGCC GAATCGATCT CGGACCCTGA CGGGTTCTGG GGCCGCGAGG GCAGGCGGCT GGACTGGATC CACCCCTATT CCAGGGTGAA GAACACCGAT TTCGCCATGG GCCAGGTCTC GGTGAAGTGG TTCGAGGACG GCATCCTGAA CGCCTCGGTC AACTGCATCG ACCGCCACCT GCCCGGGCGC GCGAACCAGG CCGCGATCAT CTTCGAGCCG GACGACCCGG ACCAGCCGGC GCGCCACATC ACCTATGCGG AACTGTCGGA AAAGGTGAAC CGCTTCGCCA ACGTGCTGCT GAGCCAGGGG GTGATGCGCG GCGACCGGGT GGTGATCTAC CTGCCGATGA TCCCCGAGGC GGCCTATGCC ATGCTGGCCT GCGCGCGGAT CGGCGCCATC CACTCCATCG TCTTCGCCGG CTTCTCGCCC GACGCGCTGG CCAACCGCAT CAACGACAGC GGCGCCAAGC TGGTGATCAC CGCCGACACC GCGCCGCGCG GCGGCCGCAA GACGGCGCTG AAGTCGAATA CCGACGCGGC GCTGCTGCAT TGCTCGGACC GGGTGCGCTG CCTGGTGGTC AGGCATACCG GCGACCAGAC CAGCTGGATC GACGGGCGCG ACGTGGACGT GCTGGCGATG ATGGAGCAGG TCAGCCCGGA TTGCCCGCCG CGGCCGATGA ATGCCGAGGA CCCGCTGTTC ATCCTCTATA CCTCGGGCTC GACGGGCAAG CCCAAGGGCG TGGTGCATTC GACCGCCGGC TACCTGCTTT ATGCCGCGAT GACGCATCAA TACGTCTTCG ACTACAAGGA CGGCGACATC TTCTGGTGCA CGGCCGACGT GGGGTGGGTG ACGGGGCACA GCTATATCGT CTACGGCCCG CTGGCCAACG GCGCCACGAC GCTGATGTTC GAGGGCGTGC CGACCTGGCC GGATGCCGGC CGCTTCTGGG CGGTCTGCGA AAAGCACGGG GTCAACCAGT TCTACACCGC GCCGACCGCC ATCCGGGCGC TGATGGGGCA GGGGCCGGAA TGGGTCGAGA AGCACGACCT GTCCAGCCTG CGGGTGCTGG GCACGGTGGG CGAGCCGATC AACCCCGAGG CCTGGGTCTG GTACGACCGG CATGTGGGCA AGGGGCGCTG CCCGATCGTC GACACCTGGT GGCAGACCGA GACCGGGGGT CACATGATCA CCTCGCTGCC CGGCGCGATC GAGGCCAAGC CGGGCTCGGC GACGCTGCCC TTCTTCGGGG TCAGGCCGGT GGTTCTGGAT GCCTCGAGCG GGGCGGTGCA GGAGGGCGAC GGGGTCGAGG GGGTGCTGTG CATCGCCGAC AGCTGGCCGG GGCAGATGCG CACGGTCTGG GGCGACCACC AGCGCTTCAT GGAGACCTAT TTCCAGCAAT ATCCGGGCTA TTACTTCACC GGCGACGGCT GCCGGCGGGA CGAGGACGGC TATTACTGGA TCACCGGGCG GGTGGACGAC GTGATCAACG TCTCGGGCCA CCGGATGGGC ACGGCCGAGG TGGAATCGGC GCTGGTGGCG CATGAGAAGG TGGCCGAGGC GGCGGTGGTG GGCTATCCGC ACCCGCTGAA GGGCCAGGGC ATCTATGCCT ATGTGACGCT GATGAACGGG GTCGAGCCCA GCGACGAGCT GCGCGCCGAC CTTGAGAAAT GGGTGCGCAC CGAGATCGGC CCGATCGCCA AGCCCGACCT GATCCAATGG GCGCCGGGCC TGCCCAAGAC CCGTTCGGGC AAGATCATGC GCCGCATCCT GCGCAAGATC GCCGAGGACG ATTTCGGCGC CCTCGGAGAC ATCTCCACGC TCGCAGACCC GGGCGTCGTG GACCAACTCA TCGAAAACAG AATGAACCGC GCCTGA
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Protein sequence | MTIETSGKHP IPPGFGDALV QPGDYARMYA ESISDPDGFW GREGRRLDWI HPYSRVKNTD FAMGQVSVKW FEDGILNASV NCIDRHLPGR ANQAAIIFEP DDPDQPARHI TYAELSEKVN RFANVLLSQG VMRGDRVVIY LPMIPEAAYA MLACARIGAI HSIVFAGFSP DALANRINDS GAKLVITADT APRGGRKTAL KSNTDAALLH CSDRVRCLVV RHTGDQTSWI DGRDVDVLAM MEQVSPDCPP RPMNAEDPLF ILYTSGSTGK PKGVVHSTAG YLLYAAMTHQ YVFDYKDGDI FWCTADVGWV TGHSYIVYGP LANGATTLMF EGVPTWPDAG RFWAVCEKHG VNQFYTAPTA IRALMGQGPE WVEKHDLSSL RVLGTVGEPI NPEAWVWYDR HVGKGRCPIV DTWWQTETGG HMITSLPGAI EAKPGSATLP FFGVRPVVLD ASSGAVQEGD GVEGVLCIAD SWPGQMRTVW GDHQRFMETY FQQYPGYYFT GDGCRRDEDG YYWITGRVDD VINVSGHRMG TAEVESALVA HEKVAEAAVV GYPHPLKGQG IYAYVTLMNG VEPSDELRAD LEKWVRTEIG PIAKPDLIQW APGLPKTRSG KIMRRILRKI AEDDFGALGD ISTLADPGVV DQLIENRMNR A
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